RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ARL4DP49703 201 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 ACY1Q03154 408 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 KIF5AQ12840 1032 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 MSLNQ13421 630 aaPredicted RBP19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 OLIG2Q13516 323 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 PARP6Q2NL67 630 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 GPR33Q49SQ1 333 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 DNTTIP2Q5QJE6 756 aaKnown RBP19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 DENND5AQ6IQ26 1287 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 ARMC6Q6NXE6 501 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 OOSP2Q86WS3 158 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 NXPE1Q8N323 547 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 SIDT2Q8NBJ9 832 aaKnown RBP19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 GALNT6Q8NCL4 622 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 OR13C4Q8NGS5 318 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 INSM2Q96T92 566 aaPredicted RBP19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 COPS8Q99627 209 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 VPS37BQ9H9H4 285 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 LNPEPQ9UIQ6 1025 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 KCND3Q9UK17 655 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 RARRES3Q9UL19 164 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 TLCD2A6NGC4 264 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 SUV39H1O43463 412 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 ZNF28P17035 718 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 DLSTP36957 453 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 PRLHRP49683 370 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 KCNC4Q03721 635 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 TUBB3Q13509 450 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 KRT33BQ14525 404 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 GSE1Q14687 1217 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 P3H1Q32P28 736 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 AADACL2Q6P093 401 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 CFAP206Q8IYR0 622 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 CARFQ8N187 725 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 HM13Q8TCT9 377 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 APOBEC4Q8WW27 367 aaKnown RBP19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 ELMO2Q96JJ3 720 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 KIR3DX1Q9H7L2 352 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 LRRC40Q9H9A6 602 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 HRASLS2Q9NWW9 162 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 PADI1Q9ULC6 663 aa19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 CFAP20Q9Y6A4 193 aaKnown RBP19.88■□□□□ 0.77
PDLIM4-206ENST00000474421 ASH1LQ9NR48 2969 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 IGHV5-51A0A0C4DH38 117 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 C17orf113A0A1B0GUU1 675 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 UBA6A0AVT1 1052 aaPredicted RBP19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 PSMD3O43242 534 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 WISP1O95388 367 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 ATP1B2P14415 290 aaPredicted RBP19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 PPP1CAP62136 330 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 HSD11B2P80365 405 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 TMPRSS15P98073 1019 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 SPARCL1Q14515 664 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 FAM71DQ8N9W8 422 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 CLMPQ9H6B4 373 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 SLC24A2Q9UI40 661 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 CROTQ9UKG9 612 aa19.87■□□□□ 0.77
PDLIM4-206ENST00000474421 LDB2O43679 373 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 SGTAO43765 313 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 OAS2P29728 719 aaKnown RBP19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 MC4RP32245 332 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 CSRP3P50461 194 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 SEPT6Q14141 434 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 DEFB109BQ30KR1 87 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 KCTD11Q693B1 232 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 CAPRIN2Q6IMN6 1127 aaKnown RBP19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 C16orf46Q6P387 395 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 ZNF449Q6P9G9 518 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 MAP3K3Q99759 626 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 ZDHHC3Q9NYG2 299 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 IMPACTQ9P2X3 320 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 FAM8A1Q9UBU6 413 aa19.86■□□□□ 0.77
PDLIM4-206ENST00000474421 MYO18BQ8IUG5 2567 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 H7C0S8 307 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 ZBTB11O95625 1053 aaPredicted RBP19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 POLBP06746 335 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 GSTM1P09488 218 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 FOLR1P15328 257 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 NFKB2Q00653 900 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 GSTM4Q03013 218 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 PRKAA1Q13131 559 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 KLF1Q13351 362 aaPredicted RBP19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 TMTC4Q5T4D3 741 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 D2HGDHQ8N465 521 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 SPDYE1Q8NFV5 336 aaPredicted RBP19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 OR8K5Q8NH50 307 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 DNAJC1Q96KC8 554 aaKnown RBP19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 RMDN2Q96LZ7 410 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 ALS2CR12Q96Q35 445 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 FAM96AQ9H5X1 160 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 NLE1Q9NVX2 485 aaPredicted RBP19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 PCDHGA6Q9Y5G7 932 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 PIKFYVEQ9Y2I7 2098 aa19.85■□□□□ 0.77
PDLIM4-206ENST00000474421 IGLV3-16A0A075B6K0 115 aa19.84■□□□□ 0.77
PDLIM4-206ENST00000474421 OR6C74A6NCV1 312 aa19.84■□□□□ 0.77
PDLIM4-206ENST00000474421 C21orf140B9A014 251 aa19.84■□□□□ 0.77
PDLIM4-206ENST00000474421 MATN2O00339 956 aa19.84■□□□□ 0.77
PDLIM4-206ENST00000474421 IFRD1O00458 451 aaPredicted RBP19.84■□□□□ 0.77
PDLIM4-206ENST00000474421 TERTO14746 1132 aaKnown RBP19.84■□□□□ 0.77
PDLIM4-206ENST00000474421 RECKO95980 971 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms