RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 RASSF9O75901 435 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 AP2A2O94973 939 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 PRSS56P0CW18 603 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 MSNP26038 577 aaKnown RBP10.93□□□□□ -0.66
CKS1B-206ENST00000474215 RHDQ02161 417 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 GSE1Q14687 1217 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 DBN1Q16643 649 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 MANEAQ5SRI9 462 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 TSTD2Q5T7W7 516 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 CEACAM20Q6UY09 585 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 NLRP9Q7RTR0 991 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 LILRA3Q8N6C8 439 aaPredicted RBP10.93□□□□□ -0.66
CKS1B-206ENST00000474215 NKD1Q969G9 470 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 HDAC10Q969S8 669 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 CTRCQ99895 268 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 ZNF768Q9H5H4 540 aaKnown RBP10.93□□□□□ -0.66
CKS1B-206ENST00000474215 VPS37BQ9H9H4 285 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 SMARCAL1Q9NZC9 954 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 RIMKLBQ9ULI2 386 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 JRKLQ9Y4A0 524 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 COLEC10Q9Y6Z7 277 aa10.93□□□□□ -0.66
CKS1B-206ENST00000474215 PTPRQQ9UMZ3 2332 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 ZNF106Q9H2Y7 1883 aaKnown RBP10.92□□□□□ -0.66
CKS1B-206ENST00000474215 GOLGA6L3A6NEY3 463 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 OR51F1A6NGY5 319 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 EIF4E1BA6NMX2 242 aaKnown RBP10.92□□□□□ -0.66
CKS1B-206ENST00000474215 ERVH48-1M5A8F1 160 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 KALRNO60229 2985 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 GSTM1P09488 218 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 NSG1P42857 185 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 KCNJ1P48048 391 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 SEPHS1P49903 392 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 ATP1A2P50993 1020 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 GSTM4Q03013 218 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 ACVR1Q04771 509 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 RPA4Q13156 261 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 SRSF6Q13247 344 aaKnown RBP10.92□□□□□ -0.66
CKS1B-206ENST00000474215 KRT33BQ14525 404 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 PLCL1Q15111 1095 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 ZNF658BQ4V348 819 aaPredicted RBP10.92□□□□□ -0.66
CKS1B-206ENST00000474215 CACHD1Q5VU97 1274 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 LYPLAL1Q5VWZ2 237 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 IRGCQ6NXR0 463 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 DUS1LQ6P1R4 473 aaKnown RBP10.92□□□□□ -0.66
CKS1B-206ENST00000474215 ZNF449Q6P9G9 518 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 FAM92BQ6ZTR7 304 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 PRSS42Q7Z5A4 293 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 VASH2Q86V25 355 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 PRELID2Q8N945 189 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 OR13J1Q8NGT2 312 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 JPH3Q8WXH2 748 aaPredicted RBP10.92□□□□□ -0.66
CKS1B-206ENST00000474215 KLHL6Q8WZ60 621 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 SLC39A7Q92504 469 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 WBP1Q96G27 269 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 RMDN2Q96LZ7 410 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 ZNF778Q96MU6 729 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 TTC1Q99614 292 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 SPRY4Q9C004 299 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 KIR3DX1Q9H7L2 352 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 APMAPQ9HDC9 416 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 EIF2B3Q9NR50 452 aaKnown RBP10.92□□□□□ -0.66
CKS1B-206ENST00000474215 SIDT1Q9NXL6 827 aaKnown RBP10.92□□□□□ -0.66
CKS1B-206ENST00000474215 SLC2A6Q9UGQ3 507 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 SLC24A2Q9UI40 661 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 PILRAQ9UKJ1 303 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 HEBP2Q9Y5Z4 205 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 ATMQ13315 3056 aa10.92□□□□□ -0.66
CKS1B-206ENST00000474215 OR6C74A6NCV1 312 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 HAX1O00165 279 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 AP3B1O00203 1094 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 QSOX1O00391 747 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 GOT2P00505 430 aaKnown RBP10.91□□□□□ -0.66
CKS1B-206ENST00000474215 NELFEP18615 380 aaKnown RBP10.91□□□□□ -0.66
CKS1B-206ENST00000474215 NDUFS1P28331 727 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 PDHA2P29803 388 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 FOXN2P32314 431 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 CD151P48509 253 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 NPY2RP49146 381 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 BASP1P80723 227 aaKnown RBP10.91□□□□□ -0.66
CKS1B-206ENST00000474215 FOXM1Q08050 763 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 ITIH4Q14624 930 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 IL11RAQ14626 422 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 PCID2Q5JVF3 399 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 KIAA1614Q5VZ46 1190 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 AFTPHQ6ULP2 937 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 PCSK4Q6UW60 755 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 PACS1Q6VY07 963 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 CERS6Q6ZMG9 384 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 CACNA2D3Q8IZS8 1091 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 IL22RA1Q8N6P7 574 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 ZSCAN1Q8NBB4 408 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 PPHLN1Q8NEY8 458 aaKnown RBP10.91□□□□□ -0.66
CKS1B-206ENST00000474215 OR6P1Q8NGX9 317 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 OR4L1Q8NH43 312 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 UBXN4Q92575 508 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 TTC9Q92623 222 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 PEX13Q92968 403 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.91□□□□□ -0.66
CKS1B-206ENST00000474215 SGSM3Q96HU1 749 aa10.91□□□□□ -0.66
CKS1B-206ENST00000474215 PBKQ96KB5 322 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms