RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 NAT14Q8WUY8 206 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 KIAA1191Q96A73 305 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 MAGEB18Q96M61 343 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 TIMM29Q9BSF4 260 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 LGR4Q9BXB1 951 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 COG4Q9H9E3 785 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 PRMT8Q9NR22 394 aaPredicted RBP10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 IGSF5Q9NSI5 407 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 COPG2Q9UBF2 871 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 SUSD2Q9UGT4 822 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 EIF2B4Q9UI10 523 aaKnown RBP10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 ADAM21Q9UKJ8 722 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 CNOT6Q9ULM6 557 aaKnown RBP10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 DNAJC16Q9Y2G8 782 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 NUMA1Q14980 2115 aa10.09□□□□□ -0.79
PRPF38A-202ENST00000474048 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 POM121BA6NF01 834 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 PDZK1P1A8MUH7 402 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 PRR5-ARHGAP8B1AHC4 643 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 TK2O00142 265 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 TNFRSF10CO14798 259 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 RASGRP1O95267 797 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 TOP3BO95985 862 aaKnown RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 BPGMP07738 259 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ENO2P09104 434 aaPredicted RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 IDSP22304 550 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ATP5F1P24539 256 aaPredicted RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 CD38P28907 300 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 CA5AP35218 305 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ARL1P40616 181 aaPredicted RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 DHPSP49366 369 aaPredicted RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 PGGT1BP53609 377 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 NAA20P61599 178 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 RACK1P63244 317 aaKnown RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ARHGAP8P85298 464 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 OVGP1Q12889 678 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ILF3Q12906 894 aaKnown RBP eCLIP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 RPA4Q13156 261 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 LRP8Q14114 963 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 TSNQ15631 228 aaKnown RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 CHI3L2Q15782 390 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 PDK4Q16654 411 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ACSBG2Q5FVE4 666 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 LIPMQ5VYY2 423 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 LYSMD4Q5XG99 296 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 TTC19Q6DKK2 380 aaPredicted RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 TSSK4Q6SA08 328 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ZYG11AQ6WRX3 759 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 GCNT7Q6ZNI0 430 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 CDHR3Q6ZTQ4 885 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 SH2D5Q6ZV89 423 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 UBE2R2Q712K3 238 aaPredicted RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ARMCX6Q7L4S7 300 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 PIWIL4Q7Z3Z4 852 aaKnown RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 HID1Q8IV36 788 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 TMEFF1Q8IYR6 380 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 FBXO39Q8N4B4 442 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 CFAP61Q8NHU2 1237 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 GIMAP7Q8NHV1 300 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ANKRD49Q8WVL7 239 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 CCDC97Q96F63 343 aaPredicted RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 PDLIM5Q96HC4 596 aaKnown RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 UBXN10Q96LJ8 280 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 LINC00615Q96LM1 132 aaPredicted RBP10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 DPEP2Q9H4A9 486 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 MANSC1Q9H8J5 431 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 KLC4Q9NSK0 619 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ZNF358Q9NW07 568 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 WWOXQ9NZC7 414 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 NUDT4Q9NZJ9 180 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 NCKIPSDQ9NZQ3 722 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 DLGAP2Q9P1A6 1054 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 FBXO4Q9UKT5 387 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ACSL5Q9ULC5 683 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 SUFUQ9UMX1 484 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 DOLKQ9UPQ8 538 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 SLC17A4Q9Y2C5 497 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 CA5BQ9Y2D0 317 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 PRKAB1Q9Y478 270 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 ANGPTL3Q9Y5C1 460 aa10.08□□□□□ -0.8
PRPF38A-202ENST00000474048 CEP192Q8TEP8 1941 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 TMEM202A6NGA9 273 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 NCF1BA6NI72 391 aaPredicted RBP10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 NCF1CA8MVU1 366 aaPredicted RBP10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 H0Y8X5 98 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 CHUKO15111 745 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 SLC16A5O15375 505 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 TRIM13O60858 407 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 HSPA4LO95757 839 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 ANXA5P08758 320 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 NCF1P14598 390 aaPredicted RBP10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 SLC2A4P14672 509 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 GRK2P25098 689 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 CNR2P34972 360 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 DPP6P42658 865 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 PREPP48147 710 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 PFN3P60673 137 aa10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 SRP54P61011 504 aaKnown RBP10.07□□□□□ -0.8
PRPF38A-202ENST00000474048 STX3Q13277 289 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms