RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ZNF449Q6P9G9 518 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 SYCE2Q6PIF2 218 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 FIGLAQ6QHK4 219 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 PIP4P1Q86T03 277 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 TLK2Q86UE8 772 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 FOXRED2Q8IWF2 684 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF595Q8IYB9 648 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 SPC24Q8NBT2 197 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 FAM216AQ8WUB2 273 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 RND1Q92730 232 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 MR1Q95460 341 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 RPL36ALQ969Q0 106 aaKnown RBP4.13□□□□□ -1.75
BRCA1-212ENST00000473961 CCDC47Q96A33 483 aaKnown RBP4.13□□□□□ -1.75
BRCA1-212ENST00000473961 MOB3AQ96BX8 217 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 SPDL1Q96EA4 605 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 URB1-AS1Q96HZ7 61 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 PRMT6Q96LA8 375 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-212ENST00000473961 FAM81BQ96LP2 452 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 SLC22A12Q96S37 553 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 GFI1Q99684 422 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 CMKLR1Q99788 373 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 FAM129AQ9BZQ8 928 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 DBNDD1Q9H9R9 158 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 ABCB8Q9NUT2 735 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 VPS18Q9P253 973 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 PTGFRNQ9P2B2 879 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 B3GALT5Q9Y2C3 310 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 SNX9Q9Y5X1 595 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 PTPRCP08575 1304 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 OOEPA6NGQ2 149 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 ENO4A6NNW6 628 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 PLK4O00444 970 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 MEIS2O14770 477 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 XRCC3O43542 346 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 SPRY1O43609 319 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 KCNJ13O60928 360 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 LUC7L3O95232 432 aaKnown RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 LDLRP01130 860 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 GBAP04062 536 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 SUPT20HL2P0C7V6 817 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 IGHV4-30-4P0DP06 118 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 STMN1P16949 149 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 GABRA5P31644 462 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 GNL1P36915 607 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 PRKCIP41743 596 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 EEF1A1P68104 462 aaKnown RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 TUBB4BP68371 445 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 MZT1Q08AG7 82 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 UGCGQ16739 394 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 MEP1BQ16820 701 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF674Q2M3X9 581 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 CCDC92Q53HC0 331 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 RNASEH2BQ5TBB1 312 aaKnown RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 EEF1A1P5Q5VTE0 462 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 FAM91A1Q658Y4 838 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 TRNP1Q6NT89 227 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 ENPP7Q6UWV6 458 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 LINC00696Q6ZRV3 163 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 PIWIL3Q7Z3Z3 882 aaKnown RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 ABI3BPQ7Z7G0 1075 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 HOOK3Q86VS8 718 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 MAP7D3Q8IWC1 876 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 CHERPQ8IWX8 916 aaKnown RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 RNF113BQ8IZP6 322 aaKnown RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 RYBPQ8N488 228 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 KCNH5Q8NCM2 988 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF548Q8NEK5 533 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 RDM1Q8NG50 284 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 OR2AK2Q8NG84 335 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 WASF1Q92558 559 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 PIGTQ969N2 578 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 LMF2Q9BU23 707 aaKnown RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 FUT8Q9BYC5 575 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 PANK2Q9BZ23 570 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 MMADHCQ9H3L0 296 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-212ENST00000473961 FN3KQ9H479 309 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 RETREG1Q9H6L5 497 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 IL1RAPL2Q9NP60 686 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 DNAJB9Q9UBS3 223 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 KNSTRNQ9Y448 316 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 YIPF1Q9Y548 306 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 RPGRIP1LQ68CZ1 1315 aa4.12□□□□□ -1.75
BRCA1-212ENST00000473961 ARHGEF17Q96PE2 2063 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 MED19A0JLT2 244 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 LRRD1A4D1F6 860 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 TRIM77I1YAP6 450 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 SLC33A1O00400 549 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 TNFRSF13BO14836 293 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF263O14978 683 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 TO15178 435 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 GPR137BO60478 399 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 POLR2CP19387 275 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 HLA-DPA1P20036 260 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 USP8P40818 1118 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 TMPOP42166 694 aaKnown RBP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ALDH3A2P51648 485 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 PGGT1BP53609 377 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 MLLT10P55197 1068 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 CD81P60033 236 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms