RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 FMO4P31512 558 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 SLC19A1P41440 591 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 CD151P48509 253 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 CUL1Q13616 776 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 CAPRIN2Q6IMN6 1127 aaKnown RBP20.35■□□□□ 0.85
TOP3A-204ENST00000472959 GALNT7Q86SF2 657 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 CCDC25Q86WR0 208 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 RBM12BQ8IXT5 1001 aaKnown RBP20.35■□□□□ 0.85
TOP3A-204ENST00000472959 IFT20Q8IY31 132 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 C2CD4AQ8NCU7 369 aaPredicted RBP20.35■□□□□ 0.85
TOP3A-204ENST00000472959 IFT81Q8WYA0 676 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 CXorf40BQ96DE9 158 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.35■□□□□ 0.85
TOP3A-204ENST00000472959 WWP1Q9H0M0 922 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 UCK1Q9HA47 277 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 POT1Q9NUX5 634 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 MOCS1Q9NZB8 636 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 RABGEF1Q9UJ41 708 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 PSMD13Q9UNM6 376 aa20.35■□□□□ 0.85
TOP3A-204ENST00000472959 OR52A4PA6NMU1 304 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 PKMP14618 531 aaKnown RBP20.34■□□□□ 0.85
TOP3A-204ENST00000472959 MAGEA4P43358 317 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 LEPRP48357 1165 aaKnown RBP20.34■□□□□ 0.85
TOP3A-204ENST00000472959 CARSP49589 748 aaKnown RBP20.34■□□□□ 0.85
TOP3A-204ENST00000472959 INSM1Q01101 510 aaPredicted RBP20.34■□□□□ 0.85
TOP3A-204ENST00000472959 MGAT5Q09328 741 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 RPE65Q16518 533 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 SYTL3Q4VX76 610 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 CTSL3PQ5NE16 218 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 TEDDM1Q5T9Z0 273 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 TRMT10BQ6PF06 316 aaKnown RBP20.34■□□□□ 0.85
TOP3A-204ENST00000472959 CYS1Q717R9 158 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 SPRED1Q7Z699 444 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 TMPRSS12Q86WS5 348 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 CACTIN-AS1Q8N1I8 211 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 GALNT15Q8N3T1 639 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 LILRA3Q8N6C8 439 aaPredicted RBP20.34■□□□□ 0.85
TOP3A-204ENST00000472959 Q8N9G6 341 aaPredicted RBP20.34■□□□□ 0.85
TOP3A-204ENST00000472959 ASZ1Q8WWH4 475 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 TMEM159Q96B96 161 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 SLC38A3Q99624 504 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 OR52A5Q9H2C5 316 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 CCDC68Q9H2F9 335 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 FBXO6Q9NRD1 293 aaPredicted RBP20.34■□□□□ 0.85
TOP3A-204ENST00000472959 HEBP2Q9Y5Z4 205 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 COMMD10Q9Y6G5 202 aa20.34■□□□□ 0.85
TOP3A-204ENST00000472959 ARHGEF17Q96PE2 2063 aaPredicted RBP20.34■□□□□ 0.85
TOP3A-204ENST00000472959 SLC5A10A0PJK1 596 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 IQCF5A8MTL0 148 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 IFRD1O00458 451 aaPredicted RBP20.33■□□□□ 0.85
TOP3A-204ENST00000472959 APOA4P06727 396 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 MTHFD1P11586 935 aaKnown RBP20.33■□□□□ 0.85
TOP3A-204ENST00000472959 ITGB6P18564 788 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 AOAHP28039 575 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 ALDH4A1P30038 563 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 CCR7P32248 378 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 BOP1Q14137 746 aaKnown RBP20.33■□□□□ 0.85
TOP3A-204ENST00000472959 TMED2Q15363 201 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 CLPPQ16740 277 aaPredicted RBP20.33■□□□□ 0.85
TOP3A-204ENST00000472959 ZNF789Q5FWF6 425 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 CHCHD4Q8N4Q1 142 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 ZFPM2Q8WW38 1151 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 RMDN2Q96LZ7 410 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 INSM2Q96T92 566 aaPredicted RBP20.33■□□□□ 0.85
TOP3A-204ENST00000472959 LRRN3Q9H3W5 708 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 SLC40A1Q9NP59 571 aa20.33■□□□□ 0.85
TOP3A-204ENST00000472959 SPTBN2O15020 2390 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 CACNA1AO00555 2505 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 NTN3O00634 580 aaPredicted RBP20.32■□□□□ 0.84
TOP3A-204ENST00000472959 B4GAT1O43505 415 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 TCEA3O75764 348 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 HAUS5O94927 633 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 RPLP0P05388 317 aaKnown RBP20.32■□□□□ 0.84
TOP3A-204ENST00000472959 RHOXF2BP0C7M4 288 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 PDHA2P29803 388 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 PREPP48147 710 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 EPHA4P54764 986 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 OR1D5P58170 312 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 TUBB4BP68371 445 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 CCL7P80098 99 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 MPP1Q00013 466 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 FOXC1Q12948 553 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 CDCP2Q5VXM1 449 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 C3orf62Q6ZUJ4 267 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 TMEM26Q6ZUK4 368 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 OTOAQ7RTW8 1153 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 TMPRSS7Q7RTY8 843 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 PDZD3Q86UT5 571 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 RELL1Q8IUW5 271 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 KRT222Q8N1A0 295 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 SPDYE1Q8NFV5 336 aaPredicted RBP20.32■□□□□ 0.84
TOP3A-204ENST00000472959 LKAAEAR1Q8TD35 194 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 C12orf66Q96MD2 445 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 FMO2Q99518 471 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 RHOXF2Q9BQY4 288 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 IMP3Q9NV31 184 aaKnown RBP20.32■□□□□ 0.84
TOP3A-204ENST00000472959 NSMCE4AQ9NXX6 385 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 KCNK4Q9NYG8 393 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 ZFATQ9P243 1243 aa20.32■□□□□ 0.84
TOP3A-204ENST00000472959 COLEC10Q9Y6Z7 277 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms