RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 SLC5A10A0PJK1 596 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 FAM159BA6NKW6 160 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 GPC4O75487 556 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 DKK1O94907 266 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 HAUS5O94927 633 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 TRIM16O95361 564 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 AHSGP02765 367 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 TUBBP07437 444 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 AOAHP28039 575 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 GPR3P46089 330 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 MPP1Q00013 466 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 E2F1Q01094 437 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 NR1D2Q14995 579 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 SMAD1Q15797 465 aaKnown RBP19.57■□□□□ 0.72
SF1-213ENST00000472725 ZNF789Q5FWF6 425 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 PLEKHS1Q5SXH7 462 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 CAPRIN2Q6IMN6 1127 aaKnown RBP19.57■□□□□ 0.72
SF1-213ENST00000472725 TRMT10CQ7L0Y3 403 aaKnown RBP19.57■□□□□ 0.72
SF1-213ENST00000472725 OTOAQ7RTW8 1153 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 ZNF438Q7Z4V0 828 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 WDR48Q8TAF3 677 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 SLC37A2Q8TED4 501 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 AARSD1Q9BTE6 412 aaKnown RBP19.57■□□□□ 0.72
SF1-213ENST00000472725 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.57■□□□□ 0.72
SF1-213ENST00000472725 OR52A5Q9H2C5 316 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 CDC42EP4Q9H3Q1 356 aaKnown RBP19.57■□□□□ 0.72
SF1-213ENST00000472725 UCK1Q9HA47 277 aa19.57■□□□□ 0.72
SF1-213ENST00000472725 E5RI56 91 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 IFRD1O00458 451 aaPredicted RBP19.56■□□□□ 0.72
SF1-213ENST00000472725 RFPL3O75679 317 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 SLCO2B1O94956 709 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 EML2O95834 649 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 BRAFP15056 766 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 CHRM3P20309 590 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 RPL10P27635 214 aaKnown RBP19.56■□□□□ 0.72
SF1-213ENST00000472725 NDUFS1P28331 727 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 ATP5DP30049 168 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 CCR7P32248 378 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 SKIV2L2P42285 1042 aaKnown RBP19.56■□□□□ 0.72
SF1-213ENST00000472725 BIRC2Q13490 618 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 KYNUQ16719 465 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 SYTL3Q4VX76 610 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.56■□□□□ 0.72
SF1-213ENST00000472725 UGT3A1Q6NUS8 523 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 WDR93Q6P2C0 686 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 CNSTQ6PJW8 725 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 XKR5Q6UX68 686 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 CAPN12Q6ZSI9 719 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 NAT14Q8WUY8 206 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 CPNE1Q99829 537 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 NINJ2Q9NZG7 142 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 TXNDC16Q9P2K2 825 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 LRIT1Q9P2V4 623 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 CPNE7Q9UBL6 633 aa19.56■□□□□ 0.72
SF1-213ENST00000472725 DCDC2BA2VCK2 349 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 RHPN2P1A8MT19 583 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 VPS26AO75436 327 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 C1QAP02745 245 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 GABRB3P28472 473 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 CSE1LP55060 971 aaKnown RBP19.55■□□□□ 0.72
SF1-213ENST00000472725 UBE2IP63279 158 aaKnown RBP19.55■□□□□ 0.72
SF1-213ENST00000472725 SIM1P81133 766 aaPredicted RBP19.55■□□□□ 0.72
SF1-213ENST00000472725 HHEXQ03014 270 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 BOP1Q14137 746 aaKnown RBP19.55■□□□□ 0.72
SF1-213ENST00000472725 CLCA4Q14CN2 919 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 TTLL9Q3SXZ7 439 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 GUSBP11Q6P575 273 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 ZNF549Q6P9A3 640 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 CCNI2Q6ZMN8 369 aaPredicted RBP19.55■□□□□ 0.72
SF1-213ENST00000472725 EFL1Q7Z2Z2 1120 aaKnown RBP19.55■□□□□ 0.72
SF1-213ENST00000472725 STRA8Q7Z7C7 330 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 PDZD3Q86UT5 571 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 TRIM48Q8IWZ4 208 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 SLC22A15Q8IZD6 547 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 CNPY4Q8N129 248 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 IFI44Q8TCB0 444 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 FBF1Q8TES7 1133 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 CXorf40BQ96DE9 158 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 CYTH2Q99418 400 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 WWP1Q9H0M0 922 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 RHOJQ9H4E5 214 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 TOR4AQ9NXH8 423 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 ZNF624Q9P2J8 865 aaPredicted RBP19.55■□□□□ 0.72
SF1-213ENST00000472725 WDR37Q9Y2I8 494 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 COLEC10Q9Y6Z7 277 aa19.55■□□□□ 0.72
SF1-213ENST00000472725 CPED1A4D0V7 1026 aa19.54■□□□□ 0.72
SF1-213ENST00000472725 IQCF5A8MTL0 148 aa19.54■□□□□ 0.72
SF1-213ENST00000472725 EIF3FO00303 357 aaPredicted RBP19.54■□□□□ 0.72
SF1-213ENST00000472725 NIPSNAP2O75323 286 aa19.54■□□□□ 0.72
SF1-213ENST00000472725 VIPP01282 170 aa19.54■□□□□ 0.72
SF1-213ENST00000472725 MTHFD1P11586 935 aaKnown RBP19.54■□□□□ 0.72
SF1-213ENST00000472725 SLC19A1P41440 591 aa19.54■□□□□ 0.72
SF1-213ENST00000472725 MAZP56270 477 aaKnown RBP19.54■□□□□ 0.72
SF1-213ENST00000472725 DNAJC3Q13217 504 aa19.54■□□□□ 0.72
SF1-213ENST00000472725 SEPT7Q16181 437 aaKnown RBP19.54■□□□□ 0.72
SF1-213ENST00000472725 RPE65Q16518 533 aa19.54■□□□□ 0.72
SF1-213ENST00000472725 CLPPQ16740 277 aaPredicted RBP19.54■□□□□ 0.72
SF1-213ENST00000472725 FAM45BPQ6NSW5 357 aa19.54■□□□□ 0.72
SF1-213ENST00000472725 KRT222Q8N1A0 295 aa19.54■□□□□ 0.72
SF1-213ENST00000472725 FAM45AQ8TCE6 357 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms