RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CPNE1Q99829 537 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 ASCL2Q99929 193 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 HAUS8Q9BT25 410 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 CINPQ9BW66 212 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 RTN4RQ9BZR6 473 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 IL1RAPL2Q9NP60 686 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 EQTNQ9NQ60 294 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 SIRT3Q9NTG7 399 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 ATG4BQ9Y4P1 393 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 PXDNQ92626 1479 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 RIMS2Q9UQ26 1411 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 C5orf52A6NGY3 159 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 ANKDD1BA6NHY2 528 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 LRRC72A6NJI9 287 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 AP3B1O00203 1094 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 SLC33A1O00400 549 aaPredicted RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 PLSCR1O15162 318 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TO15178 435 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CCNT1O60563 726 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 GSRP00390 522 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 RLN1P04808 185 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CYP11B1P15538 503 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CD22P20273 847 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CASTP20810 708 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 TGM2P21980 687 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 DDX6P26196 483 aaKnown RBP eCLIP2.62□□□□□ -1.99
XRN1-210ENST00000472697 ALDH1B1P30837 517 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 HOXA13P31271 388 aaPredicted RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 GP2P55259 537 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 PRKCEQ02156 737 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CFHR3Q02985 330 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PNLIPRP3Q17RR3 467 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TMEM119Q4V9L6 283 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PHLDA2Q53GA4 152 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 LACTB2Q53H82 288 aaPredicted RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 SP5Q6BEB4 398 aaPredicted RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 VWA1Q6PCB0 445 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TMEM88Q6PEY1 159 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 ARHGAP22Q7Z5H3 698 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TLK2Q86UE8 772 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 GSPT2Q8IYD1 628 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 MRPL43Q8N983 215 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 OR10S1Q8NGN2 331 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 ARRDC2Q8TBH0 407 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PRMT6Q96LA8 375 aaPredicted RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 PCGF1Q9BSM1 259 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 FNDC11Q9BVV2 318 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 KCNK15Q9H427 330 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 RWDD1Q9H446 243 aaPredicted RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 EVA1AQ9H8M9 152 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 Q9N2K0 584 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PFDN4Q9NQP4 134 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 DNAJC17Q9NVM6 304 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 DDX18Q9NVP1 670 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 DNAJB4Q9UDY4 337 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TINAGQ9UJW2 476 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PCDHA12Q9UN75 941 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 ADAMTS5Q9UNA0 930 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CDC14AQ9UNH5 594 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 ZFR2Q9UPR6 939 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 ADCY9O60503 1353 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TOPAZ1Q8N9V7 1692 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 ADAMTS13Q76LX8 1427 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 KNDC1Q76NI1 1749 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 WNK3Q9BYP7 1800 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CFAP65Q6ZU64 1925 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 TRBV5-7A0A0A0MS05 114 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 A6NNC1 897 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PRSS46E5RG02 174 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PPIP5K2O43314 1243 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 DDNO94850 711 aaPredicted RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 PNPP00491 289 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 MT-ATP6P00846 226 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TSPY4P0CV99 314 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TSPY10P0CW01 314 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 GZMAP12544 262 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 KRT13P13646 458 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 ACO1P21399 889 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 MATN1P21941 496 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PCMT1P22061 227 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 HRH2P25021 359 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 ACAA2P42765 397 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 MATR3P43243 847 aaKnown RBP eCLIP2.62□□□□□ -1.992e-9■■■■■ 33.8
XRN1-210ENST00000472697 C21orf58P58505 322 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 KIAA1024LP59773 190 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CD81P60033 236 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 CRHR2Q13324 411 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 MTA1Q13330 715 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TOB2Q14106 344 aaPredicted RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 R3HDM1Q15032 1099 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 CNGA3Q16281 694 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 BOLA3Q53S33 107 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 TRIM72Q6ZMU5 477 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 MACC1Q6ZN28 852 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 C15orf39Q6ZRI6 1047 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 DEFB132Q7Z7B7 95 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 PEG10Q86TG7 708 aaKnown RBP2.62□□□□□ -1.99
XRN1-210ENST00000472697 TMPRSS12Q86WS5 348 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 OR52N4Q8NGI2 321 aa2.62□□□□□ -1.99
XRN1-210ENST00000472697 DNASE1L2Q92874 299 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms