RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SNX15Q9NRS6 342 aa10.34□□□□□ -0.75
UBE2F-220ENST00000472479 SLC23A2Q9UGH3 650 aa10.34□□□□□ -0.75
UBE2F-220ENST00000472479 ACSL5Q9ULC5 683 aa10.34□□□□□ -0.75
UBE2F-220ENST00000472479 PSMD13Q9UNM6 376 aa10.34□□□□□ -0.75
UBE2F-220ENST00000472479 RUVBL2Q9Y230 463 aaKnown RBP10.34□□□□□ -0.75
UBE2F-220ENST00000472479 SDK1Q7Z5N4 2213 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 A0A087X1B8 175 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 CCDC166P0CW27 439 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 ALPPL2P10696 532 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 NME1P15531 152 aaKnown RBP10.33□□□□□ -0.76
UBE2F-220ENST00000472479 ENGP17813 658 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 FDXRP22570 491 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 GCAP28676 217 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 CLCNKAP51800 687 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 SUZ12Q15022 739 aaKnown RBP10.33□□□□□ -0.76
UBE2F-220ENST00000472479 KLC3Q6P597 504 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 PIM3Q86V86 326 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 ZNF547Q8IVP9 402 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 TRIM48Q8IWZ4 208 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 ACVR1CQ8NER5 493 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 CCL4L1Q8NHW4 92 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 LKAAEAR1Q8TD35 194 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 ANKRD7Q92527 254 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 LINGO1Q96FE5 620 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 SCARF2Q96GP6 870 aaPredicted RBP10.33□□□□□ -0.76
UBE2F-220ENST00000472479 LINC00615Q96LM1 132 aaPredicted RBP10.33□□□□□ -0.76
UBE2F-220ENST00000472479 SMC6Q96SB8 1091 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 DHRS4Q9BTZ2 278 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 WWP1Q9H0M0 922 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 PCMTD2Q9NV79 361 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 GALPQ9UBC7 116 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 GULP1Q9UBP9 304 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 KLF15Q9UIH9 416 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 NFS1Q9Y697 457 aa10.33□□□□□ -0.76
UBE2F-220ENST00000472479 EML5Q05BV3 1969 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 GON4LQ3T8J9 2241 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 PLXNA2O75051 1894 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 A0A1W2PPM1 405 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 YKT6O15498 198 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 FFAR2O15552 330 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 SGTAO43765 313 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 C2P06681 752 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CBSLP0DN79 551 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 ENO3P13929 434 aaPredicted RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 SLC2A4P14672 509 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 MAP4P27816 1152 aaKnown RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 AOAHP28039 575 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CBSP35520 551 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CCT5P48643 541 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CCT8P50990 548 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CLCN7P51798 805 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 KPNA2P52292 529 aaKnown RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 PGGT1BP53609 377 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 BNIP3Q12983 259 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 RPA4Q13156 261 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CSHL1Q14406 222 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 RASA2Q15283 850 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 FAM83EQ2M2I3 478 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 DEFB133Q30KQ1 61 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 UAP1L1Q3KQV9 507 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 AASDHQ4L235 1098 aaPredicted RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 ACSBG2Q5FVE4 666 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 PPM1JQ5JR12 505 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 AGAP9Q5VTM2 703 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 PEAR1Q5VY43 1037 aaPredicted RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 KCTD16Q68DU8 428 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 TCEAL6Q6IPX3 200 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 LRRC8EQ6NSJ5 796 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CEP97Q8IW35 865 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 SRRM1Q8IYB3 904 aaKnown RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 C4orf33Q8N1A6 199 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CCDC63Q8NA47 563 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 GLMNQ92990 594 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 TCEAL3Q969E4 200 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 CXorf40BQ96DE9 158 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 FERD3LQ96RJ6 166 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 TRIM54Q9BYV2 358 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 STN1Q9H668 368 aaKnown RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 POPDC3Q9HBV1 291 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 KCNK9Q9NPC2 374 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 PRDM8Q9NQV8 689 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 GPR27Q9NS67 375 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 IMP3Q9NV31 184 aaKnown RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 TAAR2Q9P1P5 351 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 SIRPGQ9P1W8 387 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 KLHL42Q9P2K6 505 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 NOVA2Q9UNW9 492 aaKnown RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 PCYT1BQ9Y5K3 369 aaPredicted RBP10.32□□□□□ -0.76
UBE2F-220ENST00000472479 DOCK9Q9BZ29 2069 aa10.32□□□□□ -0.76
UBE2F-220ENST00000472479 SCN8AQ9UQD0 1980 aa10.31□□□□□ -0.76
UBE2F-220ENST00000472479 A0A1B0GTQ1 180 aa10.31□□□□□ -0.76
UBE2F-220ENST00000472479 B4DGG1 531 aa10.31□□□□□ -0.76
UBE2F-220ENST00000472479 COPEO14579 308 aa10.31□□□□□ -0.76
UBE2F-220ENST00000472479 YY2O15391 372 aa10.31□□□□□ -0.76
UBE2F-220ENST00000472479 ATP8B1O43520 1251 aa10.31□□□□□ -0.76
UBE2F-220ENST00000472479 PIAS2O75928 621 aa10.31□□□□□ -0.76
UBE2F-220ENST00000472479 SYF2O95926 243 aaKnown RBP10.31□□□□□ -0.76
UBE2F-220ENST00000472479 RPN2P04844 631 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms