RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 CYP2R1Q6VVX0 501 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 GPR141Q7Z602 305 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 FUNDC1Q8IVP5 155 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 RBFAQ8N0V3 343 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 LKAAEAR1Q8TD35 194 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 SLCO4A1Q96BD0 722 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 C19orf43Q9BQ61 176 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 OSBPL6Q9BZF3 934 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 NOL11Q9H8H0 719 aaKnown RBP17.12■□□□□ 0.33
RRP1-202ENST00000471909 SPAG4Q9NPE6 437 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 POLG2Q9UHN1 485 aa17.12■□□□□ 0.33
RRP1-202ENST00000471909 CNOT6Q9ULM6 557 aaKnown RBP17.12■□□□□ 0.33
RRP1-202ENST00000471909 GLYATL1P3A0A0U1RQE8 302 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 TRIM24O15164 1050 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 RPS3P23396 243 aaKnown RBP eCLIP17.11■□□□□ 0.33
RRP1-202ENST00000471909 STT3AP46977 705 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 CDH15P55291 814 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 SFSWAPQ12872 951 aaKnown RBP17.11■□□□□ 0.33
RRP1-202ENST00000471909 CHRNA6Q15825 494 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 C22orf39Q6P5X5 142 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 CRTC1Q6UUV9 634 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 ZBTB49Q6ZSB9 765 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 LYSMD1Q96S90 227 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 HGH1Q9BTY7 390 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 TBCCD1Q9NVR7 557 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 EIF2B4Q9UI10 523 aaKnown RBP17.11■□□□□ 0.33
RRP1-202ENST00000471909 TCRBV3S1A0A5B6 114 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 SH3PXD2BA1X283 911 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 E2F3O00716 465 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 ATP6V1G1O75348 118 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 ITGB6P18564 788 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 ACRV1P26436 265 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 MAGEA8P43361 318 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 FAM47BQ8NA70 645 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 TUBGCP3Q96CW5 907 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 ECHDC3Q96DC8 303 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 UHRF1Q96T88 793 aaPredicted RBP17.11■□□□□ 0.33
RRP1-202ENST00000471909 SLC25A23Q9BV35 468 aa17.11■□□□□ 0.33
RRP1-202ENST00000471909 CXorf51AA0A1B0GTR3 108 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 PRORSD1PA6NEY8 169 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 NEDD8-MDP1E9PL57 170 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 PLOD2O00469 737 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 ESRRBO95718 433 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 MLYCDO95822 493 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 EPHA5P54756 1037 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 STX1BP61266 288 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 NAA20P61599 178 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 SBSNQ6UWP8 590 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 CLVS1Q8IUQ0 354 aaPredicted RBP17.1■□□□□ 0.33
RRP1-202ENST00000471909 ISG20Q96AZ6 181 aaKnown RBP17.1■□□□□ 0.33
RRP1-202ENST00000471909 FAIMQ9NVQ4 179 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 ZNHIT2Q9UHR6 403 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 SLCO3A1Q9UIG8 710 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 GNPTGQ9UJJ9 305 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 CROCCQ5TZA2 2017 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 NRP2O60462 931 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 CRCPO75575 148 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 STAMBPO95630 424 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 SPAM1P38567 509 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 ENTPD1P49961 510 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 NME5P56597 212 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 KIF19Q2TAC6 998 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 HMBOX1Q6NT76 420 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 PATL1Q86TB9 770 aaKnown RBP17.1■□□□□ 0.33
RRP1-202ENST00000471909 CBARPQ8N350 705 aaPredicted RBP17.1■□□□□ 0.33
RRP1-202ENST00000471909 SMYD1Q8NB12 490 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 GPR26Q8NDV2 337 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 SCRN2Q96FV2 425 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 DUS3LQ96G46 650 aaKnown RBP17.1■□□□□ 0.33
RRP1-202ENST00000471909 LINC00597Q9H2U6 94 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 SUV39H2Q9H5I1 410 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 CRLS1Q9UJA2 301 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 SARDHQ9UL12 918 aa17.1■□□□□ 0.33
RRP1-202ENST00000471909 A0A087WXM4 84 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 GRM6O15303 877 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 SLC25A14O95258 325 aaPredicted RBP17.09■□□□□ 0.33
RRP1-202ENST00000471909 HGFP14210 728 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 CKMT2P17540 419 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 C16orf72Q14CZ0 275 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 RBBP7Q16576 425 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 C18orf21Q32NC0 220 aaPredicted RBP17.09■□□□□ 0.33
RRP1-202ENST00000471909 GRAMD4Q6IC98 578 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 DPY19L3Q6ZPD9 716 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 OR56A4Q8NGH8 313 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 BBS2Q9BXC9 721 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 TDP1Q9NUW8 608 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 NUDT4Q9NZJ9 180 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 CHD7Q9P2D1 2997 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 PDE4DIPQ5VU43 2346 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 MRASO14807 208 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 TIPRLO75663 272 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 TRIM16O95361 564 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 RHOP08100 348 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 UROSP10746 265 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 LBPP18428 481 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 CTNNB1P35222 781 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 BMPR1AP36894 532 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 KCTD21Q4G0X4 260 aa17.09■□□□□ 0.33
RRP1-202ENST00000471909 NHSL2Q5HYW2 709 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms