RNA–Protein interactions for RNA: ENST00000471681.5

CCDC66-213, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 3,120 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-213ENST00000471681 HLA-DPA1P20036 260 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 OGNP20774 298 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 CD68P34810 354 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 COILP38432 576 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 CPA2P48052 419 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 GDI2P50395 445 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ZNF140P52738 457 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 RPL7AP62424 266 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 YPEL5P62699 121 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 PRAMEP78395 509 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 DSC2Q02487 901 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 SLC10A2Q12908 348 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TDGQ13569 410 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 SCARB2Q14108 478 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ZNF460Q14592 562 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 MTF1Q14872 753 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 SPRED3Q2MJR0 410 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 PDCD4Q53EL6 469 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TEX44Q53QW1 395 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 C9orf64Q5T6V5 341 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 RNF219Q5W0B1 726 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 FSTL4Q6MZW2 842 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ESRP1Q6NXG1 681 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 FBXL22Q6P050 247 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 IYDQ6PHW0 289 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 VHLLQ6RSH7 139 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ZNF852Q6ZMS4 543 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 HFE2Q6ZVN8 426 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TRMT10CQ7L0Y3 403 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 CCDC36Q8IYA8 594 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 SLC44A3Q8N4M1 653 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 OR56B2PQ8NGI1 322 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 MOSPD2Q8NHP6 518 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TEX47Q8TBZ9 253 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TSPEARQ8WU66 669 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 FAM172AQ8WUF8 416 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 PIH1D2Q8WWB5 315 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 MRPS31Q92665 395 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 GATA6Q92908 595 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 FGF13Q92913 245 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 SLC22A18Q96BI1 424 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 EFHD2Q96C19 240 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 HAUS1Q96CS2 278 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TUBGCP3Q96CW5 907 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 RMDN1Q96DB5 314 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 STAMBPL1Q96FJ0 436 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 CCDC138Q96M89 665 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ADAD1Q96M93 576 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ANKRD27Q96NW4 1050 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 HHIPQ96QV1 700 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 DHRS9Q9BPW9 319 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 BBS2Q9BXC9 721 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TDRD1Q9BXT4 1180 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 MIR1-1HGQ9H1L0 117 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 SLC28A3Q9HAS3 691 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 VCX3AQ9NNX9 186 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ENTPD7Q9NQZ7 604 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 FAM114A2Q9NRY5 505 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TAS2R7Q9NYW3 318 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 COQ3Q9NZJ6 369 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 MARCH2Q9P0N8 246 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 GGA2Q9UJY4 613 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ACSL6Q9UKU0 697 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 MMP17Q9ULZ9 603 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 AP4E1Q9UPM8 1137 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 USH1CQ9Y6N9 552 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 PIAS3Q9Y6X2 628 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 A0A1W2PQF6 199 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 KANSL1LA0AUZ9 987 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 KRT87PA6NCN2 255 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ARHGAP42A6NI28 874 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 PSMD9O00233 223 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 DNALI1O14645 258 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TSPAN3O60637 253 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 URI1O94763 535 aaPredicted RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TRIM16O95361 564 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 BMP10O95393 424 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TBX18O95935 607 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 CLPTM1O96005 669 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ICAM2P13598 275 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 PRPH2P23942 346 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 GSTM2P28161 218 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 GGT5P36269 586 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ARCN1P48444 511 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ADKP55263 362 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 EEF1A1P68104 462 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ARHGAP8P85298 464 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 EEF1A2Q05639 463 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 RUNX3Q13761 415 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 DHCR24Q15392 516 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 UGP2Q16851 508 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 HNRNPA1L2Q32P51 320 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ITPRIPL2Q3MIP1 535 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 C4orf17Q53FE4 359 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 USP39Q53GS9 565 aaKnown RBP3.46□□□□□ -1.86
CCDC66-213ENST00000471681 TCTE1Q5JU00 501 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 KCNT1Q5JUK3 1230 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ANKRD20A2Q5SQ80 823 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 EEF1A1P5Q5VTE0 462 aa3.46□□□□□ -1.86
CCDC66-213ENST00000471681 ANKRD20A3Q5VUR7 823 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms