RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 KLK8O60259 260 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 NOBOXO60393 691 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 PSIP1O75475 530 aaKnown RBP9.68□□□□□ -0.86
SF3A1-207ENST00000471342 TRIM16O95361 564 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 PROCP04070 461 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 KRT4P19013 534 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 ATP5DP30049 168 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 CRHR1P34998 444 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 SLC26A3P40879 764 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 DHPSP49366 369 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-207ENST00000471342 SERPINB8P50452 374 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 AFF3P51826 1226 aaKnown RBP9.68□□□□□ -0.86
SF3A1-207ENST00000471342 UBE2IP63279 158 aaKnown RBP9.68□□□□□ -0.86
SF3A1-207ENST00000471342 GRIK2Q13002 908 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 C1orf61Q13536 156 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 CCDC6Q16204 474 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 TECRLQ5HYJ1 363 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 WDR45BQ5MNZ6 344 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 PLEKHS1Q5SXH7 462 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 FAM219BQ5XKK7 198 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 WASH2PQ6VEQ5 465 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 LRRTM4Q86VH4 590 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 DCP2Q8IU60 420 aaKnown RBP9.68□□□□□ -0.86
SF3A1-207ENST00000471342 NAGSQ8N159 534 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 ZBTB2Q8N680 514 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 LMNTD1Q8N9Z9 388 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 ACMSDQ8TDX5 336 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 PATE1Q8WXA2 126 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 MOCOSQ96EN8 888 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 ATP6V1G3Q96LB4 118 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 OR2M4Q96R27 311 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 UNKQ9C0B0 810 aaKnown RBP9.68□□□□□ -0.86
SF3A1-207ENST00000471342 DERL2Q9GZP9 239 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 MIR1-1HGQ9H1L0 117 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 CYP4F12Q9HCS2 524 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 WASH6PQ9NQA3 447 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 SLC17A7Q9P2U7 560 aa9.68□□□□□ -0.86
SF3A1-207ENST00000471342 A0A1B0GTQ1 180 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 ARHGEF33A8MVX0 844 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 MEI4A8MW99 385 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PROB1E7EW31 1015 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 KMOO15229 486 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 YY2O15391 372 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 TAPBPO15533 448 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PRPF4O43172 522 aaKnown RBP eCLIP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PLIN3O60664 434 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PRAMEF4O60810 478 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PIAS2O75928 621 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 KRT38O76015 456 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 RHOBTB1O94844 696 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 KLHL2O95198 593 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 MPOP05164 745 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 OR56A5P0C7T3 313 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 MPC1LP0DKB6 136 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 ACP5P13686 325 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 STMN1P16949 149 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 DGKAP23743 735 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 CRABP2P29373 138 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 AKT1P31749 480 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 RPA3P35244 121 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 HOXD12P35452 270 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 SLC19A1P41440 591 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 GNPDA1P46926 289 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 SLC18A1P54219 525 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 MAGOHP61326 146 aaKnown RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PLA2G4EQ3MJ16 856 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 AGAP9Q5VTM2 703 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PRAMEF9Q5VWM5 478 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PTRHD1Q6GMV3 140 aaKnown RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 NEK10Q6ZWH5 1172 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 CHST15Q7LFX5 561 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PARGQ86W56 976 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 CFAP206Q8IYR0 622 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 FSTL5Q8N475 847 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 GDAP1Q8TB36 358 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 HM13Q8TCT9 377 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 SAP25Q8TEE9 199 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 SNX19Q92543 992 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PIGKQ92643 395 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 GLMNQ92990 594 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 KIAA1191Q96A73 305 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 ZNF514Q96K75 400 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 DPEP2Q9H4A9 486 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 CARS2Q9HA77 564 aaKnown RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 SSU72Q9NP77 194 aaKnown RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PRDM8Q9NQV8 689 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 AASDHPPTQ9NRN7 309 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 KLC4Q9NSK0 619 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 FAM86C1Q9NVL1 165 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 TAS2R13Q9NYV9 303 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 KLQ9UEF7 1012 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 RAPGEFL1Q9UHV5 662 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 SMG5Q9UPR3 1016 aaKnown RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 VPS9D1Q9Y2B5 631 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 PLLPQ9Y342 182 aa9.67□□□□□ -0.86
SF3A1-207ENST00000471342 ARID1BQ8NFD5 2236 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-207ENST00000471342 THADAQ6YHU6 1953 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 CEP192Q8TEP8 1941 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 SPAG17Q6Q759 2223 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 IQANK1A0A1B0GTG1 560 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms