RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 INTS6LQ5JSJ4 861 aaKnown RBP13.56□□□□□ -0.24
NPHP4-207ENST00000470763 FBXO47Q5MNV8 452 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 SYT6Q5T7P8 510 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-207ENST00000470763 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-207ENST00000470763 B3GALNT2Q8NCR0 500 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 OR10A6Q8NH74 314 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 RNF34Q969K3 372 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 NTAN1Q96AB6 310 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 UGT2B28Q9BY64 529 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 DUSP16Q9BY84 665 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 ENTPD7Q9NQZ7 604 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 RBM22Q9NW64 420 aaKnown RBP eCLIP13.56□□□□□ -0.24
NPHP4-207ENST00000470763 SMPD4Q9NXE4 827 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 TMEFF2Q9UIK5 374 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-207ENST00000470763 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.56□□□□□ -0.24
NPHP4-207ENST00000470763 EIF3LQ9Y262 564 aaKnown RBP13.56□□□□□ -0.24
NPHP4-207ENST00000470763 KCTD3Q9Y597 815 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 PCDHGB1Q9Y5G3 927 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 CENPBD1B2RD01 187 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 SCO2O43819 266 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 PTTG1O95997 202 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 CYP11A1P05108 521 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 NPR3P17342 541 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 FCGRTP55899 365 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 LCP2Q13094 533 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 TTC23LQ6PF05 361 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 CATSPERGQ6ZRH7 1159 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 CLEC20AQ6ZU45 233 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 NEK10Q6ZWH5 1172 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 DET1Q7L5Y6 550 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 PLPPR4Q7Z2D5 763 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 GPRIN1Q7Z2K8 1008 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 FAM126BQ8IXS8 530 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 EID3Q8N140 333 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 BEND7Q8N7W2 519 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-207ENST00000470763 OR2T12Q8NG77 320 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 TSPEARQ8WU66 669 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 ZNF560Q96MR9 790 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 MYOCQ99972 504 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 ZBED2Q9BTP6 218 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 ACOT13Q9NPJ3 140 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 CNGB3Q9NQW8 809 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 KLK14Q9P0G3 267 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 OTOFQ9HC10 1997 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 PABPN1LA6NDY0 278 aaKnown RBP13.55□□□□□ -0.24
NPHP4-207ENST00000470763 ENPP3O14638 875 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 CACNG3O60359 315 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 S1PR4O95977 384 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 AKAP5P24588 427 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 AGTR2P50052 363 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 SCAPQ12770 1279 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 AGAP6Q5VW22 663 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 SLX4IPQ5VYV7 408 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 RANBP10Q6VN20 620 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 SPATA19Q7Z5L4 167 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 NECAB2Q7Z6G3 386 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 PARP16Q8N5Y8 322 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 IL17RDQ8NFM7 739 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 OR6F1Q8NGZ6 308 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 EMID1Q96A84 441 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-207ENST00000470763 REXO5Q96IC2 774 aaKnown RBP13.55□□□□□ -0.24
NPHP4-207ENST00000470763 ZNF583Q96ND8 569 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 AGAP4Q96P64 663 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 ASB2Q96Q27 587 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 BARD1Q99728 777 aaKnown RBP13.55□□□□□ -0.24
NPHP4-207ENST00000470763 RASSF1Q9NS23 344 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 QPCTLQ9NXS2 382 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 ORC6Q9Y5N6 252 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 MCM3APO60318 1980 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 HBP1O60381 514 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 DFNA5O60443 496 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 PGK2P07205 417 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 POLR2EP19388 210 aaKnown RBP13.55□□□□□ -0.24
NPHP4-207ENST00000470763 GGT5P36269 586 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 TGFBR2P37173 567 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 HCAR3P49019 387 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 WNT3AP56704 352 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 PRKG2Q13237 762 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 PTPRCAPQ14761 206 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 TPRG1LQ5T0D9 272 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 NXNL2Q5VZ03 156 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 OSTM1Q86WC4 334 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 APPL2Q8NEU8 664 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 NCLNQ969V3 563 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 FAM162AQ96A26 154 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 ZFYVE19Q96K21 471 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 DEPDC7Q96QD5 511 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 SLC9A7Q96T83 725 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 TMEM246Q9BRR3 403 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 THUMPD3Q9BV44 507 aaKnown RBP13.55□□□□□ -0.24
NPHP4-207ENST00000470763 PRKD2Q9BZL6 878 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 RNF167Q9H6Y7 350 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 NDFIP2Q9NV92 336 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 USE1Q9NZ43 259 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 SNX6Q9UNH7 406 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 BRCA2P51587 3418 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 FAM234BA2RU67 622 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 SAGE2PA6NJ88 616 aa13.55□□□□□ -0.24
NPHP4-207ENST00000470763 WISP3O95389 354 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-207ENST00000470763 DNTTP04053 509 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms