RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 DSC2Q02487 901 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 ITKQ08881 620 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 PRKD1Q15139 912 aaPredicted RBP11.65□□□□□ -0.54
LSM2-209ENST00000470083 KHDC1Q4VXA5 237 aaKnown RBP11.65□□□□□ -0.54
LSM2-209ENST00000470083 PRAMEF13Q5VWM6 474 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 ALS2CLQ60I27 953 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 TMEM207Q6UWW9 146 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 GFRALQ6UXV0 394 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 TRAPPC5Q8IUR0 188 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 CEP97Q8IW35 865 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 NACC2Q96BF6 587 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 PTERQ96BW5 349 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 EID2BQ96D98 161 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 SPOCK3Q9BQ16 436 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 NUP85Q9BW27 656 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 EPS8L2Q9H6S3 715 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 PCDH9Q9HC56 1237 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 C1GALT1Q9NS00 363 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 ETNK2Q9NVF9 386 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 NFKBIL1Q9UBC1 381 aaPredicted RBP11.65□□□□□ -0.54
LSM2-209ENST00000470083 GPN3Q9UHW5 284 aaPredicted RBP11.65□□□□□ -0.54
LSM2-209ENST00000470083 FBXL4Q9UKA2 621 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 POMT2Q9UKY4 750 aa11.65□□□□□ -0.54
LSM2-209ENST00000470083 MAP1AP78559 2803 aaPredicted RBP11.64□□□□□ -0.55
LSM2-209ENST00000470083 OR6C74A6NCV1 312 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 H3BRJ5 948 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 PRPSAP2O60256 369 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 UMODP07911 640 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 MTHFD1P11586 935 aaKnown RBP11.64□□□□□ -0.55
LSM2-209ENST00000470083 CDH3P22223 829 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 PSMA2P25787 234 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 SOX5P35711 763 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 DMPKQ09013 629 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 INAQ16352 499 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 QPCTQ16769 361 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 IRAK1BP1Q5VVH5 260 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 GPR26Q8NDV2 337 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 TEKT4Q8WW24 435 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 ZFPM2Q8WW38 1151 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 MTFMTQ96DP5 389 aaKnown RBP11.64□□□□□ -0.55
LSM2-209ENST00000470083 TUBGCP2Q9BSJ2 902 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 RAD18Q9NS91 495 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 IMP3Q9NV31 184 aaKnown RBP11.64□□□□□ -0.55
LSM2-209ENST00000470083 NEU2Q9Y3R4 380 aa11.64□□□□□ -0.55
LSM2-209ENST00000470083 CCDC66A2RUB6 948 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 ANKRD66B4E2M5 251 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 ATMINO43313 823 aaPredicted RBP11.63□□□□□ -0.55
LSM2-209ENST00000470083 CNOT3O75175 753 aaKnown RBP11.63□□□□□ -0.55
LSM2-209ENST00000470083 CBSLP0DN79 551 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 AMPD1P23109 780 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 MIPP30301 263 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 CBSP35520 551 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 JAM2P57087 298 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 ADORA2A-AS1P86434 159 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 GALNT3Q14435 633 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 AMZ2Q86W34 360 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 LRRC49Q8IUZ0 686 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.63□□□□□ -0.55
LSM2-209ENST00000470083 ARRDC2Q8TBH0 407 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 MAGEB10Q96LZ2 347 aaPredicted RBP11.63□□□□□ -0.55
LSM2-209ENST00000470083 TAAR6Q96RI8 345 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 GANQ9H2C0 597 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 KIR3DX1Q9H7L2 352 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 ZFYVE1Q9HBF4 777 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 SLC6A20Q9NP91 592 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 IFT80Q9P2H3 777 aaPredicted RBP11.63□□□□□ -0.55
LSM2-209ENST00000470083 NDOR1Q9UHB4 597 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 SLC24A2Q9UI40 661 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 PSMD13Q9UNM6 376 aa11.63□□□□□ -0.55
LSM2-209ENST00000470083 MATN2O00339 956 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 PES1O00541 588 aaKnown RBP11.62□□□□□ -0.55
LSM2-209ENST00000470083 FANCGO15287 622 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 MAP3K7O43318 606 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 UNC5CO95185 931 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 POLR2CP19387 275 aaPredicted RBP11.62□□□□□ -0.55
LSM2-209ENST00000470083 HLA-DPA1P20036 260 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 MMP11P24347 488 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 SERPINB6P35237 376 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 ARL4AP40617 200 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 LMAN1P49257 510 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 SMSP52788 366 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 FOXL2P58012 376 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 DCDP81605 110 aaKnown RBP11.62□□□□□ -0.55
LSM2-209ENST00000470083 Q0VFX4 171 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 PRKAA1Q13131 559 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 GTF2H3Q13889 308 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 DPYSL2Q16555 572 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 PLEKHA7Q6IQ23 1121 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 RHBDD2Q6NTF9 364 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 MRPL14Q6P1L8 145 aaKnown RBP11.62□□□□□ -0.55
LSM2-209ENST00000470083 FAM83HQ6ZRV2 1179 aaPredicted RBP11.62□□□□□ -0.55
LSM2-209ENST00000470083 POLNQ7Z5Q5 900 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 GPR135Q8IZ08 494 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 ACBD4Q8NC06 268 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 CATSPER1Q8NEC5 780 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 ANKRD20A12PQ8NF67 263 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 PROKR1Q8TCW9 393 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 MAML1Q92585 1016 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 CSPG4P5Q96PW8 444 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 VPS35Q96QK1 796 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms