RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 SNX20Q7Z614 316 aa6.9□□□□□ -1.3
GAPVD1-215ENST00000470056 FAM217AQ8IXS0 508 aa6.9□□□□□ -1.3
GAPVD1-215ENST00000470056 ZNF641Q96N77 438 aaPredicted RBP6.9□□□□□ -1.3
GAPVD1-215ENST00000470056 CDRT15Q96T59 188 aa6.9□□□□□ -1.3
GAPVD1-215ENST00000470056 ARL8BQ9NVJ2 186 aa6.9□□□□□ -1.3
GAPVD1-215ENST00000470056 NUDT4Q9NZJ9 180 aa6.9□□□□□ -1.3
GAPVD1-215ENST00000470056 CD274Q9NZQ7 290 aa6.9□□□□□ -1.3
GAPVD1-215ENST00000470056 ZNF221Q9UK13 617 aa6.9□□□□□ -1.3
GAPVD1-215ENST00000470056 MRPS23Q9Y3D9 190 aaKnown RBP6.9□□□□□ -1.3
GAPVD1-215ENST00000470056 PDLIM1O00151 329 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 ITGA2P17301 1181 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 ATP6V1B2P21281 511 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 HMGCLP35914 325 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 ARL13AQ5H913 290 aaPredicted RBP6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 TECRLQ5HYJ1 363 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CUZD1Q86UP6 607 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 ERI1Q8IV48 349 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CMTM8Q8IZV2 173 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 PTGR2Q8N8N7 351 aaPredicted RBP6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 OR13C4Q8NGS5 318 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CDC26Q8NHZ8 85 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 KCNK13Q9HB14 408 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 TDP1Q9NUW8 608 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 LCHNA4D1U4 455 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 POU2F2P09086 479 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 IDH3AP50213 366 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 PLK1P53350 603 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CDC42P60953 191 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CNTN1Q12860 1018 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 INTS11Q5TA45 600 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 SNX32Q86XE0 403 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 PLD6Q8N2A8 252 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 TMIEQ8NEW7 156 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 TIFAQ96CG3 184 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 TRIB3Q96RU7 358 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CYP2S1Q96SQ9 504 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 NUSAP1Q9BXS6 441 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 MAN1C1Q9NR34 630 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 ZNF358Q9NW07 568 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 TAS2R1Q9NYW7 299 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 MTF2Q9Y483 593 aaPredicted RBP6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 BNIP3LO60238 219 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 NTRK1P04629 796 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 PRKAR1AP10644 381 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 VCLP18206 1134 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CAPGP40121 348 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 SMIM11AP58511 58 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 ACTR3P61158 418 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CXorf57Q6NSI4 855 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 ERAP2Q6P179 960 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CLYBLQ8N0X4 340 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 CBARPQ8N350 705 aaPredicted RBP6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 ADPRHL2Q9NX46 363 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 FKBPLQ9UIM3 349 aa6.9□□□□□ -1.31
GAPVD1-215ENST00000470056 GLYATL1P3A0A0U1RQE8 302 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 KERAO60938 352 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 KRT36O76013 467 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 PCNAP12004 261 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 RPS3P23396 243 aaKnown RBP eCLIP6.89□□□□□ -1.315e-28■■■□□ 15.7
GAPVD1-215ENST00000470056 HERVK_113P63132 956 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 NFKB2Q00653 900 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 CARD16Q5EG05 197 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 PITRM1Q5JRX3 1037 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LINGO4Q6UY18 593 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ZNF781Q8N8C0 355 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 SUN5Q8TC36 379 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 RNF217Q8TC41 542 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 MCMBPQ9BTE3 642 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ERVK-6Q9BXR3 956 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 IL21Q9HBE4 155 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ZNF334Q9HCZ1 680 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 A8MT66 165 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 TULP3O75386 442 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 IDO1P14902 403 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ZNF37AP17032 561 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 MYL12AP19105 171 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 PPIBP23284 216 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ARNTP27540 789 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 RPL3P39023 403 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 CCT3P49368 545 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 AGKQ53H12 422 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 BRAT1Q6PJG6 821 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LRRC17Q8N6Y2 441 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LRIG1Q96JA1 1093 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 C1QTNF1Q9BXJ1 281 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 TLE6Q9H808 572 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 SARS2Q9NP81 518 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 LRRC42Q9Y546 428 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 GPIP06744 558 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 OR56A5P0C7T3 313 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 PIRTP0C851 137 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 MAPK9P45984 424 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 C22orf39Q6P5X5 142 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ZNF605Q86T29 641 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 TCAIMQ8N3R3 496 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 CELF5Q8N6W0 485 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 AGR3Q8TD06 166 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 KIAA1191Q96A73 305 aa6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 FAM120BQ96EK7 910 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-215ENST00000470056 ASB8Q9H765 288 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms