RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 R3HDM2Q9Y2K5 976 aaKnown RBP10.4□□□□□ -0.74
TGFBR3-205ENST00000468996 COLEC10Q9Y6Z7 277 aa10.4□□□□□ -0.74
TGFBR3-205ENST00000468996 BOD1L1Q8NFC6 3051 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 TCRBV7S2A1N4TA0A589 114 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 CCDC78A2IDD5 438 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 MIF4GDA9UHW6 222 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 LDB2O43679 373 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 SPAG6O75602 509 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 DLGAP3O95886 979 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 ATP1B2P14415 290 aaPredicted RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 FOLR1P15328 257 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 TCN2P20062 427 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 DLSTP36957 453 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 STAT5AP42229 794 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 POLE2P56282 527 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 MSLNQ13421 630 aaPredicted RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 POU6F1Q14863 301 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 DNTTIP2Q5QJE6 756 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 CERS6Q6ZMG9 384 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 MICALCLQ6ZW33 695 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 SNX20Q7Z614 316 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 SERPINA9Q86WD7 417 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 PPP1R3BQ86XI6 285 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 PTRH1Q86Y79 214 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 NXPE1Q8N323 547 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 LILRA3Q8N6C8 439 aaPredicted RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 OR4E2Q8NGC2 313 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 HEXDCQ8WVB3 486 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 STARD8Q92502 1023 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 UBXN4Q92575 508 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 DNAJC1Q96KC8 554 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 CATSPER2Q96P56 530 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 FERD3LQ96RJ6 166 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 CCM2Q9BSQ5 444 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 TMEM121Q9BTD3 319 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 RAB33BQ9H082 229 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 SLC25A18Q9H1K4 315 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 ARNT2Q9HBZ2 717 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 STARD5Q9NSY2 213 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 GEMIN8Q9NWZ8 242 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 FEZ2Q9UHY8 353 aaPredicted RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 RARRES3Q9UL19 164 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 PADI1Q9ULC6 663 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 PCDHB3Q9Y5E6 796 aa10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 MRPS18BQ9Y676 258 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-205ENST00000468996 OR5K3A6NET4 321 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 DDX3YO15523 660 aaKnown RBP10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 PSMD3O43242 534 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 SGTAO43765 313 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 ZNF189O75820 626 aaPredicted RBP10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 NTRK1P04629 796 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 EBLN1P0CF75 366 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 PRSS56P0CW18 603 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 FGF5P12034 268 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 POLR2CP19387 275 aaPredicted RBP10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 F8A1P23610 371 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 LMAN1P49257 510 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 ZNF140P52738 457 aaPredicted RBP10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 GDF10P55107 478 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 MC1RQ01726 317 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 KCNC4Q03721 635 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 KCNAB2Q13303 367 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 TUBB3Q13509 450 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 ERV3-1Q14264 604 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 GPR33Q49SQ1 333 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 BCL7AQ4VC05 210 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 ATP1A1-AS1Q5TC04 95 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 ZNF449Q6P9G9 518 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 FBXO38Q6PIJ6 1188 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 OOSP2Q86WS3 158 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 TMEM139Q8IV31 216 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 CLDN19Q8N6F1 224 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 PHC3Q8NDX5 983 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 ATG4AQ8WYN0 398 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 TRIM4Q9C037 500 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 LRRC40Q9H9A6 602 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 ZNF71Q9NQZ8 489 aaPredicted RBP10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 ZDHHC3Q9NYG2 299 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 SMARCAL1Q9NZC9 954 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 IMPACTQ9P2X3 320 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 SLC24A2Q9UI40 661 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 CROTQ9UKG9 612 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 COL6A6A6NMZ7 2263 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 TENM4Q6N022 2769 aa10.38□□□□□ -0.75
TGFBR3-205ENST00000468996 PIPSLA2A3N6 862 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 KLHL33A6NCF5 533 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 AGAP14A8MT82 685 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 IFRD1O00458 451 aaPredicted RBP10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 TIAF1O95411 115 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 IFNB1P01574 187 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 OAS2P29728 719 aaKnown RBP10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 HSD11B2P80365 405 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 ACY1Q03154 408 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 CDC20Q12834 499 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 PRKAA1Q13131 559 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 PRKG2Q13237 762 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 KLF1Q13351 362 aaPredicted RBP10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 MAP7Q14244 749 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 SKIDA1Q1XH10 827 aa10.37□□□□□ -0.75
TGFBR3-205ENST00000468996 P3H1Q32P28 736 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms