RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PCDHAC2Q9Y5I4 1007 aa4.91□□□□□ -1.62
LSM5-209ENST00000468872 A0A0B4J293 547 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 EDDM13A0A1B0GTR0 161 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 FEZF1A0PJY2 475 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 OR5K3A6NET4 321 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 SSX4O60224 188 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 LDB3O75112 727 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 CAMTA2O94983 1202 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 PFKFB1P16118 471 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 ITGA2P17301 1181 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 HNRNPKP61978 463 aaKnown RBP eCLIP4.9□□□□□ -1.63
LSM5-209ENST00000468872 TUBA1BP68363 451 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 CDK3Q00526 305 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 COG2Q14746 738 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 ALDH1L2Q3SY69 923 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 CCDC184Q52MB2 194 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 CST9LP1Q5W188 147 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 IL27RAQ6UWB1 636 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 ANKRD23Q86SG2 305 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 PI4KAP1Q8N8J0 262 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 MRPS27Q92552 414 aaKnown RBP4.9□□□□□ -1.63
LSM5-209ENST00000468872 NXNL1Q96CM4 212 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 ARSGQ96EG1 525 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 FER1L6-AS2Q96M78 137 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 MS4A10Q96PG2 267 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 SYT17Q9BSW7 474 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 ABHD6Q9BV23 337 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 EDEM3Q9BZQ6 932 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 CSTL1Q9H114 145 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 SLA2Q9H6Q3 261 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 EQTNQ9NQ60 294 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 RHCGQ9UBD6 479 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 CKAP5Q14008 2032 aa4.9□□□□□ -1.63
LSM5-209ENST00000468872 A0A1W2PPM1 405 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 IPO8O15397 1037 aaKnown RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 FYNP06241 537 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 CCDC175P0C221 793 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 LINGO3P0C6S8 592 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 HLA-DOBP13765 273 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 POLR2CP19387 275 aaPredicted RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 SEC61A1P61619 476 aaKnown RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 RELQ04864 619 aaPredicted RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 HYAL1Q12794 435 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 ZNF234Q14588 700 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 KRTAP5-11Q6L8G4 156 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 TRNP1Q6NT89 227 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 ASB18Q6ZVZ8 466 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 CENPVQ7Z7K6 275 aaPredicted RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 TMEM173Q86WV6 379 aaPredicted RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 OR2AJ1Q8NGZ0 328 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 PPP4R1Q8TF05 950 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 HDAC11Q96DB2 347 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 FAM81BQ96LP2 452 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 ZNF385AQ96PM9 386 aaKnown RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 MOV10L1Q9BXT6 1211 aaKnown RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 LRMDAQ9H2I8 198 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 NOL11Q9H8H0 719 aaKnown RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 PRMT7Q9NVM4 692 aaPredicted RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 IL17BQ9UHF5 180 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 TUBE1Q9UJT0 475 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 TRIP12Q14669 1992 aaPredicted RBP4.89□□□□□ -1.63
LSM5-209ENST00000468872 PDS5BQ9NTI5 1447 aa4.89□□□□□ -1.63
LSM5-209ENST00000468872 SNAPC4Q5SXM2 1469 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 A0A0G2JPF8 293 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 PRSS51A0A1B0GVH4 220 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 IFITM10A6NMD0 228 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 HNRNPCL3B7ZW38 293 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 CELF2O95319 508 aaKnown RBP4.88□□□□□ -1.63
LSM5-209ENST00000468872 GCNT3O95395 438 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 HNRNPCL4P0DMR1 293 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 MT3P25713 68 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 CCR10P46092 362 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 RAB28P51157 221 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 HSPA2P54652 639 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 SF3B4Q15427 424 aaKnown RBP eCLIP4.88□□□□□ -1.631e-6■□□□□ 10.3
LSM5-209ENST00000468872 TMEM35AQ53FP2 167 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 KLHL26Q53HC5 615 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 ARMC4Q5T2S8 1044 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 RNASEH2BQ5TBB1 312 aaKnown RBP4.88□□□□□ -1.63
LSM5-209ENST00000468872 ZNF704Q6ZNC4 412 aaPredicted RBP4.88□□□□□ -1.63
LSM5-209ENST00000468872 ZNF441Q8N8Z8 693 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 LILRB1Q8NHL6 650 aaPredicted RBP4.88□□□□□ -1.63
LSM5-209ENST00000468872 FIG4Q92562 907 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 PHF21AQ96BD5 680 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 ADGRG7Q96K78 797 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 NUP85Q9BW27 656 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 DPAGT1Q9H3H5 408 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 TBC1D17Q9HA65 648 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 HHATLQ9HCP6 504 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 TCP11L1Q9NUJ3 509 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 NPAP1Q9NZP6 1156 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 TAF1P21675 1872 aa4.88□□□□□ -1.63
LSM5-209ENST00000468872 ZCWPW2A0A1B0GU75 182 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 ANKUB1A6NFN9 424 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 C5orf60A6NFR6 353 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 EIF3DO15371 548 aaKnown RBP eCLIP4.87□□□□□ -1.63
LSM5-209ENST00000468872 ZNHIT1O43257 154 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 XRCC3O43542 346 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 KRT86O43790 486 aa4.87□□□□□ -1.63
LSM5-209ENST00000468872 WDR1O75083 606 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms