RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 COQ5Q5HYK3 327 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 C10orf62Q5T681 223 aaPredicted RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 ZNF776Q68DI1 518 aaPredicted RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 GTF2H2CQ6P1K8 395 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 ADAMTSL4Q6UY14 1074 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 NET1Q7Z628 596 aaPredicted RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 RALGPS2Q86X27 583 aaPredicted RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 RASGRP3Q8IV61 690 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 PLCD3Q8N3E9 789 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 KIF2BQ8N4N8 673 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 PNPLA1Q8N8W4 532 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 KYQ8NBH2 561 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 RBM15BQ8NDT2 890 aaKnown RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 PHC3Q8NDX5 983 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 AGR3Q8TD06 166 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 ELMO1Q92556 727 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 ATP6V1E2Q96A05 226 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 ARRDC3Q96B67 414 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 TMEM159Q96B96 161 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 FAM136AQ96C01 138 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 RHBDF1Q96CC6 855 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 MSLNLQ96KJ4 702 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 EGFL8Q99944 293 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 SLC25A23Q9BV35 468 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 C1QTNF7Q9BXJ2 289 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 CADM1Q9BY67 442 aaKnown RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 ZNF576Q9H609 170 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 WDR55Q9H6Y2 383 aaPredicted RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 TRIM39Q9HCM9 518 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 TRPS1Q9UHF7 1281 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 MTF2Q9Y483 593 aaPredicted RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 FADS3Q9Y5Q0 445 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 DNAJC15Q9Y5T4 150 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 STON1Q9Y6Q2 735 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 NUMBLQ9Y6R0 609 aa10.01□□□□□ -0.81
MSH5-213ENST00000468136 PRRC2BQ5JSZ5 2229 aaKnown RBP10.01□□□□□ -0.81
MSH5-213ENST00000468136 ATG2AQ2TAZ0 1938 aa10□□□□□ -0.81
MSH5-213ENST00000468136 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
MSH5-213ENST00000468136 PSMD12O00232 456 aaPredicted RBP10□□□□□ -0.81
MSH5-213ENST00000468136 SLC28A1O00337 649 aa10□□□□□ -0.81
MSH5-213ENST00000468136 IFRD1O00458 451 aaPredicted RBP10□□□□□ -0.81
MSH5-213ENST00000468136 UBFD1O14562 309 aaKnown RBP10□□□□□ -0.81
MSH5-213ENST00000468136 LINC01565O15544 149 aa10□□□□□ -0.81
MSH5-213ENST00000468136 RECQL5O94762 991 aaPredicted RBP10□□□□□ -0.81
MSH5-213ENST00000468136 SIX3O95343 332 aaPredicted RBP10□□□□□ -0.81
MSH5-213ENST00000468136 MATN4O95460 622 aa10□□□□□ -0.81
MSH5-213ENST00000468136 ATP6V1G2O95670 118 aa10□□□□□ -0.81
MSH5-213ENST00000468136 C6P13671 934 aa10□□□□□ -0.81
MSH5-213ENST00000468136 EPB42P16452 691 aa10□□□□□ -0.81
MSH5-213ENST00000468136 DRD1P21728 446 aa10□□□□□ -0.81
MSH5-213ENST00000468136 GPR1P46091 355 aa10□□□□□ -0.81
MSH5-213ENST00000468136 CCNG1P51959 295 aa10□□□□□ -0.81
MSH5-213ENST00000468136 CDH13P55290 713 aa10□□□□□ -0.81
MSH5-213ENST00000468136 MRPS21P82921 87 aaKnown RBP10□□□□□ -0.81
MSH5-213ENST00000468136 PCDH1Q08174 1060 aa10□□□□□ -0.81
MSH5-213ENST00000468136 TMEM115Q12893 351 aaPredicted RBP10□□□□□ -0.81
MSH5-213ENST00000468136 RPA4Q13156 261 aa10□□□□□ -0.81
MSH5-213ENST00000468136 HTR4Q13639 388 aa10□□□□□ -0.81
MSH5-213ENST00000468136 GRM2Q14416 872 aa10□□□□□ -0.81
MSH5-213ENST00000468136 MAP7D1Q3KQU3 841 aa10□□□□□ -0.81
MSH5-213ENST00000468136 GGTA1PQ4G0N0 100 aa10□□□□□ -0.81
MSH5-213ENST00000468136 FBXO43Q4G163 708 aa10□□□□□ -0.81
MSH5-213ENST00000468136 SYTL3Q4VX76 610 aa10□□□□□ -0.81
MSH5-213ENST00000468136 NEK5Q6P3R8 708 aa10□□□□□ -0.81
MSH5-213ENST00000468136 PARM1Q6UWI2 310 aa10□□□□□ -0.81
MSH5-213ENST00000468136 HACD2Q6Y1H2 254 aa10□□□□□ -0.81
MSH5-213ENST00000468136 UBE2R2Q712K3 238 aaPredicted RBP10□□□□□ -0.81
MSH5-213ENST00000468136 SCUBE1Q8IWY4 988 aa10□□□□□ -0.81
MSH5-213ENST00000468136 KLHDC8AQ8IYD2 350 aa10□□□□□ -0.81
MSH5-213ENST00000468136 CHPFQ8IZ52 775 aa10□□□□□ -0.81
MSH5-213ENST00000468136 ZNF513Q8N8E2 541 aaPredicted RBP10□□□□□ -0.81
MSH5-213ENST00000468136 PCYOX1LQ8NBM8 494 aa10□□□□□ -0.81
MSH5-213ENST00000468136 SMRP1Q8NCR6 262 aa10□□□□□ -0.81
MSH5-213ENST00000468136 FAM13CQ8NE31 585 aa10□□□□□ -0.81
MSH5-213ENST00000468136 OR2T3Q8NH03 318 aa10□□□□□ -0.81
MSH5-213ENST00000468136 LKAAEAR1Q8TD35 194 aa10□□□□□ -0.81
MSH5-213ENST00000468136 ASB12Q8WXK4 309 aa10□□□□□ -0.81
MSH5-213ENST00000468136 JADE3Q92613 823 aa10□□□□□ -0.81
MSH5-213ENST00000468136 SCAMP4Q969E2 229 aa10□□□□□ -0.81
MSH5-213ENST00000468136 PPP3R2Q96LZ3 170 aa10□□□□□ -0.81
MSH5-213ENST00000468136 ANKRD27Q96NW4 1050 aa10□□□□□ -0.81
MSH5-213ENST00000468136 LENG8Q96PV6 779 aaPredicted RBP10□□□□□ -0.81
MSH5-213ENST00000468136 KXD1Q9BQD3 176 aa10□□□□□ -0.81
MSH5-213ENST00000468136 MRPL1Q9BYD6 325 aaKnown RBP10□□□□□ -0.81
MSH5-213ENST00000468136 DPEP2Q9H4A9 486 aa10□□□□□ -0.81
MSH5-213ENST00000468136 SLC32A1Q9H598 525 aa10□□□□□ -0.81
MSH5-213ENST00000468136 DCLRE1BQ9H816 532 aa10□□□□□ -0.81
MSH5-213ENST00000468136 CLDND1Q9NY35 253 aa10□□□□□ -0.81
MSH5-213ENST00000468136 SARDHQ9UL12 918 aa10□□□□□ -0.81
MSH5-213ENST00000468136 TMPRSS11EQ9UL52 423 aa10□□□□□ -0.81
MSH5-213ENST00000468136 COPG1Q9Y678 874 aaKnown RBP10□□□□□ -0.81
MSH5-213ENST00000468136 KIAA1549LQ6ZVL6 1849 aa10□□□□□ -0.81
MSH5-213ENST00000468136 MUC22E2RYF6 1773 aaPredicted RBP9.99□□□□□ -0.81
MSH5-213ENST00000468136 DOCK8Q8NF50 2099 aa9.99□□□□□ -0.81
MSH5-213ENST00000468136 A0A0U1RQS6 177 aa9.99□□□□□ -0.81
MSH5-213ENST00000468136 SLC5A10A0PJK1 596 aa9.99□□□□□ -0.81
MSH5-213ENST00000468136 SERTM1A2A2V5 107 aa9.99□□□□□ -0.81
MSH5-213ENST00000468136 RFXAPO00287 272 aa9.99□□□□□ -0.81
MSH5-213ENST00000468136 CHUKO15111 745 aa9.99□□□□□ -0.81
MSH5-213ENST00000468136 GPR39O43194 453 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms