RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PRKAA1Q13131 559 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 MFAP5Q13361 173 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 XRCC4Q13426 336 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 RPE65Q16518 533 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 CA9Q16790 459 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 PPP6R3Q5H9R7 873 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 MARC1Q5VT66 337 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 CXXC5Q7LFL8 322 aaKnown RBP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 ZNF547Q8IVP9 402 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 GPR135Q8IZ08 494 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 ATPAF2Q8N5M1 289 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 SPATA3Q8NHX4 192 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 GLYATL1Q969I3 302 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 THOC3Q96J01 351 aaKnown RBP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 MAGED4Q96JG8 741 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 MCEEQ96PE7 176 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 KCTD15Q96SI1 283 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 TMEM121Q9BTD3 319 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 GPAMQ9HCL2 828 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 DLL4Q9NR61 685 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 CCM2LQ9NUG4 571 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 TNFRSF10DQ9UBN6 386 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 HOOK1Q9UJC3 728 aaKnown RBP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 CDC23Q9UJX2 597 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 CFAP20Q9Y6A4 193 aaKnown RBP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 TRAV17A0A0B4J275 112 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 DYTNA2CJ06 578 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 GSAPA4D1B5 854 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 RGSL1A5PLK6 1076 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 KIAA1324LA8MWY0 1029 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 EIF3CLB5ME19 914 aaKnown RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 CNOT3O75175 753 aaKnown RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 CDK14O94921 469 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 CRYABP02511 175 aaKnown RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 SLC4A1P02730 911 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 CYP1A1P04798 512 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 C8BP07358 591 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 POLR2CP19387 275 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 HLA-DPA1P20036 260 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 CA4P22748 312 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 NSFP46459 744 aaKnown RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 GSCP56915 257 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 FOLH1Q04609 750 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 GTF2H3Q13889 308 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 GALNT3Q14435 633 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 LONRF1Q17RB8 773 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 ANKRD20A8PQ5CZ79 823 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 PPP1R15BQ5SWA1 713 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 DNAJC24Q6P3W2 148 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 NCCRP1Q6ZVX7 275 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 ZNF677Q86XU0 584 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 TMEM151BQ8IW70 566 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 FMR1NBQ8N0W7 255 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 ACBD4Q8NC06 268 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 C3orf20Q8ND61 904 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 LRRN4CLQ8ND94 238 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 N4BP2L2Q92802 583 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 EIF3CQ99613 913 aaKnown RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 ZSCAN5AQ9BUG6 496 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 SNRNP25Q9BV90 132 aaKnown RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 TDRD1Q9BXT4 1180 aaKnown RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 VPS16Q9H269 839 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 C1GALT1Q9NS00 363 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 ADAM22Q9P0K1 906 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 ABI3Q9P2A4 366 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 POMT2Q9UKY4 750 aa9.92□□□□□ -0.82
HDAC3-203ENST00000467533 RPH3AQ9Y2J0 694 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 NSD1Q96L73 2696 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-203ENST00000467533 PRRC2AP48634 2157 aaKnown RBP9.91□□□□□ -0.82
HDAC3-203ENST00000467533 SIGLEC16A6NMB1 481 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 RASAL1O95294 804 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 CALB1P05937 261 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 MSL3P1P0C860 447 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 MTHFD1P11586 935 aaKnown RBP9.91□□□□□ -0.82
HDAC3-203ENST00000467533 ST6GAL1P15907 406 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 MTIF2P46199 727 aaKnown RBP9.91□□□□□ -0.82
HDAC3-203ENST00000467533 CDH6P55285 790 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 DCDP81605 110 aaKnown RBP9.91□□□□□ -0.82
HDAC3-203ENST00000467533 FMO1Q01740 532 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 CDR2Q01850 454 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 PTP4A2Q12974 167 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 CEBPEQ15744 281 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 TUBB8Q3ZCM7 444 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 C11orf96Q7Z7L8 435 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 BIVMQ86UB2 503 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 PRIMA1Q86XR5 153 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 TRAM1L1Q8N609 369 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 PROKR1Q8TCW9 393 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 CA5BP1Q8WTZ4 195 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 LYSMD1Q96S90 227 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 TREX2Q9BQ50 279 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-203ENST00000467533 ZNF559Q9BR84 538 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 NUP85Q9BW27 656 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 AP1M1Q9BXS5 423 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 POLR1EQ9GZS1 481 aaKnown RBP9.91□□□□□ -0.82
HDAC3-203ENST00000467533 KLHL25Q9H0H3 589 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 TXLNGQ9NUQ3 528 aa9.91□□□□□ -0.82
HDAC3-203ENST00000467533 DHCR7Q9UBM7 475 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms