RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ABCD1P33897 745 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 ARL1P40616 181 aaPredicted RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 PAFAH1B1P43034 410 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 HNRNPH2P55795 449 aaKnown RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 PTP4A2Q12974 167 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 NAE1Q13564 534 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 GPATCH4Q5T3I0 446 aaKnown RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 FAM69AQ5T7M9 428 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 GGNBP1Q5YKI7 109 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 METTL2BQ6P1Q9 378 aaKnown RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 KCTD18Q6PI47 426 aaPredicted RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 OR2AK2Q8NG84 335 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 ST8SIA4Q92187 359 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 METTL2AQ96IZ6 378 aaKnown RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 SLC41A2Q96JW4 573 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 C18orf12Q96KH6 178 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 IFIH1Q9BYX4 1025 aaKnown RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 BRF2Q9HAW0 419 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 C9orf78Q9NZ63 289 aaPredicted RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 GJD2Q9UKL4 321 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 TTC7AQ9ULT0 858 aaPredicted RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 GTF2A1LQ9UNN4 478 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 ERVK-11Q9UQG0 969 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 CYP46A1Q9Y6A2 500 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 UTYO14607 1347 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 TTC21BQ7Z4L5 1316 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 CENPJQ9HC77 1338 aaPredicted RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 NSD2O96028 1365 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 KTN1Q86UP2 1357 aaKnown RBP3.35□□□□□ -1.87
XRN1-206ENST00000467077 CACNA1SQ13698 1873 aa3.35□□□□□ -1.87
XRN1-206ENST00000467077 C4AP0C0L4 1744 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 A0A087X002 238 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 TTC36A6NLP5 189 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 SNAP23O00161 211 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 TNFSF14O43557 240 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 SEC31AO94979 1220 aaKnown RBP3.34□□□□□ -1.87
XRN1-206ENST00000467077 MYOD1P15172 320 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 PAX3P23760 479 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 ABCD3P28288 659 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 CDC25CP30307 473 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 BDKRB2P30411 391 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 TLX1P31314 330 aaPredicted RBP3.34□□□□□ -1.87
XRN1-206ENST00000467077 CDAP32320 146 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 NEXNQ0ZGT2 675 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 SMIM5Q71RC9 77 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 HAPLN4Q86UW8 402 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 ZNF34Q8IZ26 560 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 LINC00612Q8N6U2 182 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 NFKBIDQ8NI38 313 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 SLC25A18Q9H1K4 315 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 WASH6PQ9NQA3 447 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 DLGAP4Q9Y2H0 992 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 AAR2Q9Y312 384 aaKnown RBP3.34□□□□□ -1.87
XRN1-206ENST00000467077 CSAG2Q9Y5P2 127 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 MAP2P11137 1827 aaKnown RBP3.34□□□□□ -1.87
XRN1-206ENST00000467077 EVC2Q86UK5 1308 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 TTC21AQ8NDW8 1320 aa3.34□□□□□ -1.87
XRN1-206ENST00000467077 PLEKHG2Q9H7P9 1386 aa3.34□□□□□ -1.88
XRN1-206ENST00000467077 PXDNLA1KZ92 1463 aa3.34□□□□□ -1.88
XRN1-206ENST00000467077 VIRMAQ69YN4 1812 aaKnown RBP3.33□□□□□ -1.88
XRN1-206ENST00000467077 DICER1Q9UPY3 1922 aaKnown RBP3.33□□□□□ -1.88
XRN1-206ENST00000467077 SMCHD1A6NHR9 2005 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 LRRC53A6NM62 1247 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 XBP1P17861 261 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 HMGB2P26583 209 aaKnown RBP3.33□□□□□ -1.88
XRN1-206ENST00000467077 MAP2K2P36507 400 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 CPOXP36551 454 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 TUBP50607 506 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 GTF2H2Q13888 395 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 FGFBP1Q14512 234 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 GSTA3Q16772 222 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 ALG11Q2TAA5 492 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 COL28A1Q2UY09 1125 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 USP41Q3LFD5 358 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 GTF2H2CQ6P1K8 395 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 RBMS3Q6XE24 437 aaKnown RBP3.33□□□□□ -1.88
XRN1-206ENST00000467077 PQLC2Q6ZP29 291 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 ASB18Q6ZVZ8 466 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 ADIPOR2Q86V24 386 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 LMNTD2Q8IXW0 634 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 ESX1Q8N693 406 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 PPHLN1Q8NEY8 458 aaKnown RBP3.33□□□□□ -1.88
XRN1-206ENST00000467077 SAAL1Q96ER3 474 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 ABHD8Q96I13 439 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 CMKLR1Q99788 373 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 SYT11Q9BT88 431 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 SLC6A13Q9NSD5 602 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 PDP2Q9P2J9 529 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 SLC13A4Q9UKG4 626 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 ARHGAP26Q9UNA1 814 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 OR2W1Q9Y3N9 320 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 CEPT1Q9Y6K0 416 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 PALLDQ8WX93 1383 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 NSD3Q9BZ95 1437 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 COL5A3P25940 1745 aaPredicted RBP3.33□□□□□ -1.88
XRN1-206ENST00000467077 DLEC1Q9Y238 1755 aa3.33□□□□□ -1.88
XRN1-206ENST00000467077 AGR2O95994 175 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 MMP10P09238 476 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 CD48P09326 243 aa3.32□□□□□ -1.88
XRN1-206ENST00000467077 TYMPP19971 482 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms