RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 DCP2Q8IU60 420 aaKnown RBP16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 ZNF547Q8IVP9 402 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 OR1E3Q8WZA6 343 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 SCARF2Q96GP6 870 aaPredicted RBP16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 AARSD1Q9BTE6 412 aaKnown RBP16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 MECRQ9BV79 373 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 MRPL40Q9NQ50 206 aaKnown RBP16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 THAP1Q9NVV9 213 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 MID2Q9UJV3 735 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 MED16Q9Y2X0 877 aa16.64■□□□□ 0.25
EXOSC3-203ENST00000465229 A0A1B0GTW7 788 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 CFAP73A6NFT4 308 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 IQCF5A8MTL0 148 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 PRR5-ARHGAP8B1AHC4 643 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 GPR89AB7ZAQ6 455 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 H0YHG0 523 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 TNFRSF10CO14798 259 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 VILLO15195 856 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 C2P06681 752 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 GPR89BP0CG08 455 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 STX3Q13277 289 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 GTF2H3Q13889 308 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 FZD2Q14332 565 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 PPM1JQ5JR12 505 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 PEAR1Q5VY43 1037 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 PTRHD1Q6GMV3 140 aaKnown RBP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 CMC1Q7Z7K0 106 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 BEND7Q8N7W2 519 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 GPATCH11Q8N954 259 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 TSACCQ96A04 125 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 ZNF514Q96K75 400 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 SIKE1Q9BRV8 207 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 KCNK4Q9NYG8 393 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 COPG2Q9UBF2 871 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 GNPTGQ9UJJ9 305 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 CORO1CQ9ULV4 474 aaPredicted RBP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 GPR34Q9UPC5 381 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 VWA7Q9Y334 891 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 PRKAB1Q9Y478 270 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 DNAH14Q0VDD8 3507 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 FANCMQ8IYD8 2048 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 FAM95CA0A1B0GW59 222 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 PRSS38A1L453 326 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 GRID2O43424 1007 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 MAGEC1O60732 1142 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 NIPSNAP2O75323 286 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 TOP3BO95985 862 aaKnown RBP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 OR56A5P0C7T3 313 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 PRLHRP49683 370 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 ARFIP2P53365 341 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 CDKN2DP55273 166 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 TIAL1Q01085 375 aaKnown RBP eCLIP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 EIF2B5Q13144 721 aaKnown RBP16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 PCLAFQ15004 111 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 BCL7AQ4VC05 210 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 HECTD2Q5U5R9 776 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 C16orf46Q6P387 395 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 CRLF3Q8IUI8 442 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 TRAPPC5Q8IUR0 188 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 RDH11Q8TC12 318 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 CCDC68Q9H2F9 335 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 RMI1Q9H9A7 625 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 KCNK13Q9HB14 408 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 TMEM216Q9P0N5 145 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 GALPQ9UBC7 116 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 KLQ9UEF7 1012 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 SUSD2Q9UGT4 822 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 ZNHIT2Q9UHR6 403 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 MOSPD1Q9UJG1 213 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 SUFUQ9UMX1 484 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 COMMD10Q9Y6G5 202 aa16.63■□□□□ 0.25
EXOSC3-203ENST00000465229 PI4KAP42356 2102 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 PIKFYVEQ9Y2I7 2098 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 A0A1B0GVT2 93 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 H3BMM5 538 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 QSOX1O00391 747 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 SERPINE1P05121 402 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 FGF3P11487 239 aaPredicted RBP16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 CRABP2P29373 138 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 NXPH1P58417 271 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 SRP54P61011 504 aaKnown RBP16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 NCALDP61601 193 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 TEAD4Q15561 434 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 ALG11Q2TAA5 492 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 PYCR3Q53H96 274 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 TAF1BQ53T94 588 aaPredicted RBP16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 CRTC3Q6UUV7 619 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 C11orf96Q7Z7L8 435 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 OR6Y1Q8NGX8 325 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 RFWD2Q8NHY2 731 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 LKAAEAR1Q8TD35 194 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 SKA1Q96BD8 255 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 FAM136AQ96C01 138 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 PDXPQ96GD0 296 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 LOXL4Q96JB6 756 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 ELMO2Q96JJ3 720 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 OLFM1Q99784 485 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 MYLK2Q9H1R3 596 aa16.62■□□□□ 0.25
EXOSC3-203ENST00000465229 CAAP1Q9H8G2 361 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms