RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CLCNKAP51800 687 aa9.15□□□□□ -0.94
APP-213ENST00000464867 ADORA2A-AS1P86434 159 aa9.15□□□□□ -0.94
APP-213ENST00000464867 GPR18Q14330 331 aa9.15□□□□□ -0.94
APP-213ENST00000464867 INAQ16352 499 aa9.15□□□□□ -0.94
APP-213ENST00000464867 CDO1Q16878 200 aa9.15□□□□□ -0.94
APP-213ENST00000464867 MLIPQ5VWP3 458 aa9.15□□□□□ -0.94
APP-213ENST00000464867 CES4AQ5XG92 561 aa9.15□□□□□ -0.94
APP-213ENST00000464867 ZNF324BQ6AW86 544 aaPredicted RBP9.15□□□□□ -0.94
APP-213ENST00000464867 FAM198BQ6UWH4 519 aa9.15□□□□□ -0.94
APP-213ENST00000464867 IGFL2Q6UWQ7 119 aa9.15□□□□□ -0.94
APP-213ENST00000464867 CLEC9AQ6UXN8 241 aa9.15□□□□□ -0.94
APP-213ENST00000464867 TRIM72Q6ZMU5 477 aa9.15□□□□□ -0.94
APP-213ENST00000464867 KRBA2Q6ZNG9 492 aa9.15□□□□□ -0.94
APP-213ENST00000464867 TECPR1Q7Z6L1 1165 aa9.15□□□□□ -0.94
APP-213ENST00000464867 PRIMA1Q86XR5 153 aa9.15□□□□□ -0.94
APP-213ENST00000464867 UMODL1-AS1Q8N2C9 162 aa9.15□□□□□ -0.94
APP-213ENST00000464867 TMEM35BQ8NCS4 154 aa9.15□□□□□ -0.94
APP-213ENST00000464867 DNAJB8Q8NHS0 232 aa9.15□□□□□ -0.94
APP-213ENST00000464867 CA5BP1Q8WTZ4 195 aa9.15□□□□□ -0.94
APP-213ENST00000464867 SCAMP4Q969E2 229 aa9.15□□□□□ -0.94
APP-213ENST00000464867 SCRN2Q96FV2 425 aa9.15□□□□□ -0.94
APP-213ENST00000464867 COX14Q96I36 57 aa9.15□□□□□ -0.94
APP-213ENST00000464867 MAP3K3Q99759 626 aa9.15□□□□□ -0.94
APP-213ENST00000464867 ZNF559Q9BR84 538 aa9.15□□□□□ -0.94
APP-213ENST00000464867 SLC40A1Q9NP59 571 aa9.15□□□□□ -0.94
APP-213ENST00000464867 PCMTD2Q9NV79 361 aa9.15□□□□□ -0.94
APP-213ENST00000464867 ZNF624Q9P2J8 865 aaPredicted RBP9.15□□□□□ -0.94
APP-213ENST00000464867 MTMR6Q9Y217 621 aa9.15□□□□□ -0.94
APP-213ENST00000464867 BTRCQ9Y297 605 aa9.15□□□□□ -0.94
APP-213ENST00000464867 SIK3Q9Y2K2 1263 aa9.15□□□□□ -0.94
APP-213ENST00000464867 PTRH2Q9Y3E5 179 aaKnown RBP9.15□□□□□ -0.94
APP-213ENST00000464867 ANKRD12Q6UB98 2062 aa9.14□□□□□ -0.95
APP-213ENST00000464867 NPIPB15A6NHN6 443 aaPredicted RBP9.14□□□□□ -0.95
APP-213ENST00000464867 ARHGAP42A6NI28 874 aa9.14□□□□□ -0.95
APP-213ENST00000464867 SLC9B1P1A6NJY1 282 aa9.14□□□□□ -0.95
APP-213ENST00000464867 FAM171A2A8MVW0 826 aa9.14□□□□□ -0.95
APP-213ENST00000464867 F8W735 103 aaPredicted RBP9.14□□□□□ -0.95
APP-213ENST00000464867 PMPCBO75439 489 aa9.14□□□□□ -0.95
APP-213ENST00000464867 LHCGRP22888 699 aa9.14□□□□□ -0.95
APP-213ENST00000464867 SDC4P31431 198 aa9.14□□□□□ -0.95
APP-213ENST00000464867 LRRC63Q05C16 580 aa9.14□□□□□ -0.95
APP-213ENST00000464867 HYAL2Q12891 473 aa9.14□□□□□ -0.95
APP-213ENST00000464867 RFTN1Q14699 578 aaPredicted RBP9.14□□□□□ -0.95
APP-213ENST00000464867 PCOLCEQ15113 449 aa9.14□□□□□ -0.95
APP-213ENST00000464867 CEBPEQ15744 281 aa9.14□□□□□ -0.95
APP-213ENST00000464867 SEPT7Q16181 437 aaKnown RBP9.14□□□□□ -0.95
APP-213ENST00000464867 INSCQ1MX18 579 aa9.14□□□□□ -0.95
APP-213ENST00000464867 PTCHD3Q3KNS1 767 aa9.14□□□□□ -0.95
APP-213ENST00000464867 PRAMEF13Q5VWM6 474 aa9.14□□□□□ -0.95
APP-213ENST00000464867 TMEM198Q66K66 360 aa9.14□□□□□ -0.95
APP-213ENST00000464867 PLEKHA7Q6IQ23 1121 aa9.14□□□□□ -0.95
APP-213ENST00000464867 ARMC6Q6NXE6 501 aa9.14□□□□□ -0.95
APP-213ENST00000464867 CERS6Q6ZMG9 384 aa9.14□□□□□ -0.95
APP-213ENST00000464867 BNIPLQ7Z465 357 aa9.14□□□□□ -0.95
APP-213ENST00000464867 PTERQ96BW5 349 aa9.14□□□□□ -0.95
APP-213ENST00000464867 RIOK2Q9BVS4 552 aaKnown RBP9.14□□□□□ -0.95
APP-213ENST00000464867 AKTIPQ9H8T0 292 aa9.14□□□□□ -0.95
APP-213ENST00000464867 SP110Q9HB58 689 aa9.14□□□□□ -0.95
APP-213ENST00000464867 PDFQ9HBH1 243 aa9.14□□□□□ -0.95
APP-213ENST00000464867 SYTL2Q9HCH5 934 aa9.14□□□□□ -0.95
APP-213ENST00000464867 NDOR1Q9UHB4 597 aa9.14□□□□□ -0.95
APP-213ENST00000464867 SERTAD3Q9UJW9 196 aa9.14□□□□□ -0.95
APP-213ENST00000464867 PCM1Q15154 2024 aa9.14□□□□□ -0.95
APP-213ENST00000464867 DYTNA2CJ06 578 aa9.13□□□□□ -0.95
APP-213ENST00000464867 CCDC78A2IDD5 438 aa9.13□□□□□ -0.95
APP-213ENST00000464867 TRIM49BA6NDI0 452 aa9.13□□□□□ -0.95
APP-213ENST00000464867 AGPSO00116 658 aa9.13□□□□□ -0.95
APP-213ENST00000464867 FGF10O15520 208 aaPredicted RBP9.13□□□□□ -0.95
APP-213ENST00000464867 NUAK1O60285 661 aa9.13□□□□□ -0.95
APP-213ENST00000464867 SLC19A2O60779 497 aa9.13□□□□□ -0.95
APP-213ENST00000464867 KLF7O75840 302 aaPredicted RBP9.13□□□□□ -0.95
APP-213ENST00000464867 ZWINTO95229 277 aa9.13□□□□□ -0.95
APP-213ENST00000464867 IDSP22304 550 aa9.13□□□□□ -0.95
APP-213ENST00000464867 HALP42357 657 aa9.13□□□□□ -0.95
APP-213ENST00000464867 GABRB2P47870 512 aa9.13□□□□□ -0.95
APP-213ENST00000464867 PPP1CAP62136 330 aa9.13□□□□□ -0.95
APP-213ENST00000464867 ARG2P78540 354 aa9.13□□□□□ -0.95
APP-213ENST00000464867 TDRD12Q587J7 1177 aaKnown RBP9.13□□□□□ -0.95
APP-213ENST00000464867 PRAMEF17Q5VTA0 474 aa9.13□□□□□ -0.95
APP-213ENST00000464867 ISLR2Q6UXK2 745 aa9.13□□□□□ -0.95
APP-213ENST00000464867 B4GALNT4Q76KP1 1039 aa9.13□□□□□ -0.95
APP-213ENST00000464867 ARCQ7LC44 396 aa9.13□□□□□ -0.95
APP-213ENST00000464867 TSPAN33Q86UF1 283 aa9.13□□□□□ -0.95
APP-213ENST00000464867 SMYD4Q8IYR2 804 aaPredicted RBP9.13□□□□□ -0.95
APP-213ENST00000464867 CCDC34Q96HJ3 373 aa9.13□□□□□ -0.95
APP-213ENST00000464867 MAGED4Q96JG8 741 aa9.13□□□□□ -0.95
APP-213ENST00000464867 C18orf12Q96KH6 178 aa9.13□□□□□ -0.95
APP-213ENST00000464867 AGAP2Q99490 1192 aa9.13□□□□□ -0.95
APP-213ENST00000464867 NDC1Q9BTX1 674 aa9.13□□□□□ -0.95
APP-213ENST00000464867 LACRTQ9GZZ8 138 aa9.13□□□□□ -0.95
APP-213ENST00000464867 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
APP-213ENST00000464867 CARD9Q9H257 536 aa9.13□□□□□ -0.95
APP-213ENST00000464867 RASSF4Q9H2L5 321 aa9.13□□□□□ -0.95
APP-213ENST00000464867 ZFP64Q9NPA5 681 aa9.13□□□□□ -0.95
APP-213ENST00000464867 GPATCH2LQ9NWQ4 482 aa9.13□□□□□ -0.95
APP-213ENST00000464867 NEU3Q9UQ49 428 aa9.13□□□□□ -0.95
APP-213ENST00000464867 PCYT1BQ9Y5K3 369 aaPredicted RBP9.13□□□□□ -0.95
APP-213ENST00000464867 INTS1Q8N201 2190 aaKnown RBP9.13□□□□□ -0.95
APP-213ENST00000464867 NUP210LQ5VU65 1888 aa9.13□□□□□ -0.95
APP-213ENST00000464867 TRAV17A0A0B4J275 112 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms