RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TSSK1BQ9BXA7 367 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 P2RY12Q9H244 342 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 SLC40A1Q9NP59 571 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 POT1Q9NUX5 634 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 INTS10Q9NVR2 710 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 KCNK4Q9NYG8 393 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 GNPTGQ9UJJ9 305 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 CHMP2BQ9UQN3 213 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 VPS9D1Q9Y2B5 631 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 MSRB2Q9Y3D2 182 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 CEP295Q9C0D2 2601 aa14.21□□□□□ -0.14
SQSTM1-205ENST00000464493 IGHV1OR21-1A0A087WYE8 117 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 IQCF5A8MTL0 148 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 LIN7AO14910 233 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 S1PR4O95977 384 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 ITGB6P18564 788 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 CD1CP29017 333 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 FMO4P31512 558 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 ADARP55265 1226 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 EIF3BP55884 814 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 GPLD1P80108 840 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 CTBP1Q13363 440 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 CAPRIN2Q6IMN6 1127 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 UNC5AQ6ZN44 842 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 KCNMB4Q86W47 210 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 DENND6AQ8IWF6 608 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 RBM12BQ8IXT5 1001 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 UNC5BQ8IZJ1 945 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 NOA1Q8NC60 698 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 GABPB2Q8TAK5 448 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 LPGAT1Q92604 370 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 CFAP36Q96G28 342 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 C12orf66Q96MD2 445 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 DEPDC7Q96QD5 511 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 WDR83Q9BRX9 315 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 OR52A5Q9H2C5 316 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 UCK1Q9HA47 277 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 EPB41L5Q9HCM4 733 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 IARS2Q9NSE4 1012 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 ATXN7L1Q9ULK2 861 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 CRYL1Q9Y2S2 319 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 PCDHB1Q9Y5F3 818 aa14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 CFAP20Q9Y6A4 193 aaKnown RBP14.2□□□□□ -0.14
SQSTM1-205ENST00000464493 PRAMEF33A0A0G2JMD5 474 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 IFRD1O00458 451 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 CSO75390 466 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 CPNE6O95741 557 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 ESR1P03372 595 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 ERVK-10P10266 1014 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 MTHFD1P11586 935 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 PDHA2P29803 388 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 CCR7P32248 378 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 PREPP48147 710 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 EPHA4P54764 986 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 PLOD1Q02809 727 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 GUCY2DQ02846 1103 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 SQSTM1Q13501 440 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 BOP1Q14137 746 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 BRD3Q15059 726 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 ISXQ2M1V0 245 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 GLE1Q53GS7 698 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 ZNF789Q5FWF6 425 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 NKAIN2Q5VXU1 208 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 STEAP4Q687X5 459 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 NAPRTQ6XQN6 538 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 TMEM26Q6ZUK4 368 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 USP53Q70EK8 1073 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 PIM3Q86V86 326 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 ZBED8Q8IZ13 594 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 KRT222Q8N1A0 295 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 FBXO36Q8NEA4 188 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 OR10G6Q8NH81 332 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 FBXO25Q8TCJ0 367 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 PYROXD1Q8WU10 500 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 SEC14L1Q92503 715 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 AHCYL2Q96HN2 611 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 BIRC8Q96P09 236 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 PANX3Q96QZ0 392 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 FAM167BQ9BTA0 163 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 TBC1D10AQ9BXI6 508 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 PLAC1Q9HBJ0 212 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 PPANQ9NQ55 473 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 IMP3Q9NV31 184 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 FBXO5Q9UKT4 447 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 COLEC10Q9Y6Z7 277 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 AKAP13Q12802 2813 aa14.19□□□□□ -0.14
SQSTM1-205ENST00000464493 ASPMQ8IZT6 3477 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 ESYT3A0FGR9 886 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 SLC5A10A0PJK1 596 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 D6RAR5 112 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 H3BMM5 538 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 EIF3HO15372 352 aaKnown RBP eCLIP14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 SLC1A2P43004 574 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 CD151P48509 253 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 PPM1FP49593 454 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 GPR18Q14330 331 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 FRG1Q14331 258 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 FASTKD3Q14CZ7 662 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 CLPPQ16740 277 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms