RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 RIMKLBQ9ULI2 386 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 NEU2Q9Y3R4 380 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 B3GALT1Q9Y5Z6 326 aa12.68□□□□□ -0.38
XRN1-203ENST00000463916 PIKFYVEQ9Y2I7 2098 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 C17orf113A0A1B0GUU1 675 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 AVILO75366 819 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 CAPZBP47756 277 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 CXADRP78310 365 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 GPS1Q13098 491 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 CYP1B1Q16678 543 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 NAPRTQ6XQN6 538 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 LDB1Q86U70 411 aaPredicted RBP12.67□□□□□ -0.38
XRN1-203ENST00000463916 RBM12BQ8IXT5 1001 aaKnown RBP12.67□□□□□ -0.38
XRN1-203ENST00000463916 OR6P1Q8NGX9 317 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 FCRL3Q96P31 734 aaPredicted RBP12.67□□□□□ -0.38
XRN1-203ENST00000463916 TAAR9Q96RI9 348 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 CTRCQ99895 268 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 OR52A5Q9H2C5 316 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 COG4Q9H9E3 785 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 APMAPQ9HDC9 416 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 MARCH4Q9P2E8 410 aaPredicted RBP12.67□□□□□ -0.38
XRN1-203ENST00000463916 PYCARDQ9ULZ3 195 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 SNX12Q9UMY4 172 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 SDK2Q58EX2 2172 aa12.67□□□□□ -0.38
XRN1-203ENST00000463916 KLHL33A6NCF5 533 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 KIF5CO60282 957 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 KRT14P02533 472 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 SLC35G4P0C7Q5 338 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 MGAT1P26572 445 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 NMBRP28336 390 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 COILP38432 576 aaPredicted RBP12.66□□□□□ -0.38
XRN1-203ENST00000463916 NSG1P42857 185 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 PREPP48147 710 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 KCNJ11Q14654 390 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 PCID2Q5JVF3 399 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 ANKRD22Q5VYY1 191 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 ANKS6Q68DC2 871 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 PACS1Q6VY07 963 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 FAM92BQ6ZTR7 304 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 DTX1Q86Y01 620 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 OR4L1Q8NH43 312 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 BBC3Q96PG8 261 aaPredicted RBP12.66□□□□□ -0.38
XRN1-203ENST00000463916 TREX1Q9NSU2 369 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 SLC39A1Q9NY26 324 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 PCDHGA3Q9Y5H0 932 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 B4E171 279 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 PGRMC1O00264 195 aaKnown RBP12.66□□□□□ -0.38
XRN1-203ENST00000463916 TPSB2P20231 275 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 TSPAN7P41732 249 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 LAMB3Q13751 1172 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 GSE1Q14687 1217 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 TPSAB1Q15661 275 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 LRRC8BQ6P9F7 803 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 CCDC137Q6PK04 289 aaKnown RBP12.66□□□□□ -0.38
XRN1-203ENST00000463916 AFTPHQ6ULP2 937 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 CES3Q6UWW8 571 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 PPHLN1Q8NEY8 458 aaKnown RBP12.66□□□□□ -0.38
XRN1-203ENST00000463916 ACTRT1Q8TDG2 376 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 WDR70Q9NW82 654 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 SYBUQ9NX95 663 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 SLC24A2Q9UI40 661 aa12.66□□□□□ -0.38
XRN1-203ENST00000463916 BOD1L1Q8NFC6 3051 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.65□□□□□ -0.38
XRN1-203ENST00000463916 ANKRD34CP0C6C1 535 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 NPY2RP49146 381 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 SEPHS1P49903 392 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 SH3BP2P78314 561 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 MC2RQ01718 297 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 ITIH4Q14624 930 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 BRD3Q15059 726 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 ARHGAP40Q5TG30 622 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 TMEM164Q5U3C3 297 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 IRGCQ6NXR0 463 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 NLRP9Q7RTR0 991 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 CAND1Q86VP6 1230 aaKnown RBP12.65□□□□□ -0.38
XRN1-203ENST00000463916 MPP5Q8N3R9 675 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 PHC3Q8NDX5 983 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 CPT1BQ92523 772 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 PEX13Q92968 403 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 MFSD3Q96ES6 412 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 SGSM3Q96HU1 749 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 TRIM56Q9BRZ2 755 aaKnown RBP12.65□□□□□ -0.38
XRN1-203ENST00000463916 B3GNT4Q9C0J1 378 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 IL22Q9GZX6 179 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 SIDT1Q9NXL6 827 aaKnown RBP12.65□□□□□ -0.38
XRN1-203ENST00000463916 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.38
XRN1-203ENST00000463916 EPHA6Q9UF33 1036 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 CACNA1GO43497 2377 aa12.65□□□□□ -0.38
XRN1-203ENST00000463916 TMEM63AO94886 807 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 AP2A2O94973 939 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 LIPCP11150 499 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 ARNTP27540 789 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 MAGEA6P43360 314 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 TMPRSS3P57727 454 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 PRAMEP78395 509 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 CDK16Q00536 496 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 PLCL1Q15111 1095 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 BROXQ5VW32 411 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 RNF31Q96EP0 1072 aa12.65□□□□□ -0.39
XRN1-203ENST00000463916 KIFC1Q9BW19 673 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms