RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 IL27RAQ6UWB1 636 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 VSTM1Q6UX27 236 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TRIM72Q6ZMU5 477 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF788Q6ZQV5 615 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 C4orf50Q6ZRC1 276 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TMPRSS9Q7Z410 1059 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 BNIPLQ7Z465 357 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 KIAA1328Q86T90 577 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TTC7BQ86TV6 843 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TTC39CQ8N584 583 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SH2D3CQ8N5H7 860 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 C3orf20Q8ND61 904 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF564Q8TBZ8 553 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 DQX1Q8TE96 717 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SNRNP27Q8WVK2 155 aaKnown RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 RXFP2Q8WXD0 754 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 RFFLQ8WZ73 363 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 DDB2Q92466 427 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 C18orf8Q96DM3 657 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 HSFY1Q96LI6 401 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 CEP295NLQ96MC4 621 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 GABRG3Q99928 467 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 TTLL2Q9BWV7 592 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 SEMA4CQ9C0C4 833 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 GAREM1Q9H706 876 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PRDM16Q9HAZ2 1276 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 ITM2CQ9NQX7 267 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 WSB2Q9NYS7 404 aaPredicted RBP3.68□□□□□ -1.82
SCFD1-204ENST00000463622 BTBD3Q9Y2F9 522 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PCDHGA1Q9Y5H4 931 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 MYO16Q9Y6X6 1858 aa3.68□□□□□ -1.82
SCFD1-204ENST00000463622 PCDH15Q96QU1 1955 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 COL6A6A6NMZ7 2263 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 OBSL1O75147 1896 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 GOLGA4Q13439 2230 aaKnown RBP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 NUP205Q92621 2012 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 SYNJ2BP-COX16A0A087WUM0 186 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 TBC1D3BA6NDS4 549 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF840PA6NDX5 716 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 SIGLEC16A6NMB1 481 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 BCAT2O15382 392 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 HOXC11O43248 304 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 LRCH4O75427 683 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 DAB1O75553 588 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 MTA2O94776 668 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 ZBED1O96006 694 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 IGLV3-19P01714 112 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 IGLV3-25P01717 112 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 ATP1A1P05023 1023 aaKnown RBP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 CD48P09326 243 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 CDK4P11802 303 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 ANXA13P27216 316 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 CD6P30203 668 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 MATKP42679 507 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 CSRP3P50461 194 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 DNA2P51530 1060 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 HDAC4P56524 1084 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 YWHAGP61981 247 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 RHDQ02161 417 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 SLC25A11Q02978 314 aaKnown RBP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 EIF4EBP2Q13542 120 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 MESDQ14696 234 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 SPA17Q15506 151 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 CDO1Q16878 200 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 BSPRYQ5W0U4 402 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 DNAJC24Q6P3W2 148 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 DENND5BQ6ZUT9 1274 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 SLC26A9Q7LBE3 791 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 TRMT11Q7Z4G4 463 aaKnown RBP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 SLFN11Q7Z7L1 901 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 ZSCAN30Q86W11 494 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 FMNL3Q8IVF7 1028 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 NUP93Q8N1F7 819 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 SIX6OS1Q8N1H7 587 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 PYROXD2Q8N2H3 581 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 CCDC185Q8N715 623 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 POC1BQ8TC44 478 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 IPO4Q8TEX9 1081 aaKnown RBP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 FGF11Q92914 225 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 FBXO32Q969P5 355 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 FAM149B1Q96BN6 582 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 SPATA17Q96L03 361 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 MRGPRX1Q96LB2 322 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 C16orf45Q96MC5 204 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 PSMB7Q99436 277 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 NPY6RQ99463 290 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 UBXN6Q9BZV1 441 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 LRRC4Q9HBW1 653 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 TRPC7Q9HCX4 862 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 ZDHHC4Q9NPG8 344 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 PIGVQ9NUD9 493 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCFD1-204ENST00000463622 COX16Q9P0S2 106 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 DKK3Q9UBP4 350 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 ANAPC7Q9UJX3 599 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 ADAM21Q9UKJ8 722 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 SCML2Q9UQR0 700 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 MFHAS1Q9Y4C4 1052 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 KNL1Q8NG31 2342 aa3.67□□□□□ -1.82
SCFD1-204ENST00000463622 PI4KAP42356 2102 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms