RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	SLCO2A1	Q92959	643 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	PEX13	Q92968	403 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	CFAP36	Q96G28	342 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	CCDC74B	Q96LY2	380 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	RMDN2	Q96LZ7	410 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	PWWP2A	Q96N64	755 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	FERD3L	Q96RJ6	166 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	INSM2	Q96T92	566 aa	Predicted RBP	9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	TSSK1B	Q9BXA7	367 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	COG4	Q9H9E3	785 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	C20orf96	Q9NUD7	363 aa	Predicted RBP	9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	AKAP7	Q9P0M2	348 aa	Predicted RBP	9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	TMEM9	Q9P0T7	183 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	PISD	Q9UG56	409 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	TSR3	Q9UJK0	312 aa	Known RBP	9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	ACSL5	Q9ULC5	683 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	SNX24	Q9Y343	169 aa		9.41	□□□□□ -0.9
PSMD4-208	ENST00000462970	DSP	P15924	2871 aa	Known RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	FAM237B	A0A1B0GVD1	139 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	MAGEB16	A2A368	324 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	KLHL33	A6NCF5	533 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	PRR19	A6NJB7	356 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	IQCF5	A8MTL0	148 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	TMX2-CTNND1	H3BSU7	103 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	QSOX1	O00391	747 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	UBXN7	O94888	489 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	F7	P08709	466 aa	Predicted RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	JMJD7	P0C870	316 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	HGF	P14210	728 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	HOXB3	P14651	431 aa	Predicted RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	RBMS1	P29558	406 aa	Known RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	PDHA2	P29803	388 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	FMO4	P31512	558 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	CSF2RB	P32927	897 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	PDX1	P52945	283 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	MAPK10	P53779	464 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	GPLD1	P80108	840 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	DHX9	Q08211	1270 aa	Known RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	TMED2	Q15363	201 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	LONRF1	Q17RB8	773 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZNF470	Q6ECI4	717 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	KIAA0930	Q6ICG6	404 aa	Predicted RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	NEPRO	Q6NW34	567 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	IRGC	Q6NXR0	463 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	WASH2P	Q6VEQ5	465 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	PACS1	Q6VY07	963 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	RAB11FIP2	Q7L804	512 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	HOOK3	Q86VS8	718 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	PDIK1L	Q8N165	341 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	CACTIN-AS1	Q8N1I8	211 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	FBXO39	Q8N4B4	442 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	PHC3	Q8NDX5	983 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	WDR36	Q8NI36	951 aa	Known RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	GSDMB	Q8TAX9	411 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	SKA2	Q8WVK7	121 aa	Predicted RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	FAM136A	Q96C01	138 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	FCRL3	Q96P31	734 aa	Predicted RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	DCBLD2	Q96PD2	775 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	TGM7	Q96PF1	710 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	NRSN2	Q9GZP1	204 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	POLR1B	Q9H9Y6	1135 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	SLC40A1	Q9NP59	571 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	WASH6P	Q9NQA3	447 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	POT1	Q9NUX5	634 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	GNPTG	Q9UJJ9	305 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	CHMP2B	Q9UQN3	213 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	LOXL2	Q9Y4K0	774 aa		9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	URB1	O60287	2271 aa	Known RBP	9.4	□□□□□ -0.9
PSMD4-208	ENST00000462970	DMXL2	Q8TDJ6	3036 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	IGHV5-10-1	A0A0J9YXX1	117 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	TMEM8B	A6NDV4	472 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	FAM187A	A6NFU0	413 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	LILRA5	A6NI73	299 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	PRMT5	O14744	637 aa	Predicted RBP	9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	LIN7A	O14910	233 aa	Predicted RBP	9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	RAD51C	O43502	376 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	RASSF9	O75901	435 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	SEC31A	O94979	1220 aa	Known RBP	9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	TNFSF15	O95150	251 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	APOA4	P06727	396 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	PGAM1	P18669	254 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	ARNT	P27540	789 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	CSTF2	P33240	577 aa	Known RBP eCLIP	9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	RPL21	P46778	160 aa	Known RBP	9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	ARCN1	P48444	511 aa	Known RBP	9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	EPHA4	P54764	986 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	GFER	P55789	205 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	ARL4C	P56559	192 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	HSPA14	Q0VDF9	509 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	CALCOCO2	Q13137	446 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	PRKG2	Q13237	762 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	NR1D2	Q14995	579 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	MORF4L2	Q15014	288 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	HIF1A	Q16665	826 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	MSS51	Q4VC12	460 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	ARMC6	Q6NXE6	501 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	ZNF574	Q6ZN55	896 aa	Predicted RBP	9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	MAATS1	Q7Z4T9	603 aa		9.39	□□□□□ -0.91
PSMD4-208	ENST00000462970	FAM129C	Q86XR2	697 aa		9.39	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms