RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 VPS4AQ9UN37 437 aa15.03■□□□□ -0
SKA3-204ENST00000462482 HEBP2Q9Y5Z4 205 aa15.03■□□□□ -0
SKA3-204ENST00000462482 ALG6Q9Y672 507 aa15.03■□□□□ -0
SKA3-204ENST00000462482 CFAP20Q9Y6A4 193 aaKnown RBP15.03■□□□□ -0
SKA3-204ENST00000462482 MAST4O15021 2626 aa15.03■□□□□ -0
SKA3-204ENST00000462482 hCG_1818297A0A087WSY0 165 aa15.02■□□□□ -0
SKA3-204ENST00000462482 TTLL8A6PVC2 850 aa15.02■□□□□ -0
SKA3-204ENST00000462482 AKR1B15C9JRZ8 316 aaPredicted RBP15.02■□□□□ -0
SKA3-204ENST00000462482 GPR39O43194 453 aa15.02■□□□□ -0
SKA3-204ENST00000462482 TIAF1O95411 115 aa15.02■□□□□ -0
SKA3-204ENST00000462482 GP1BBP13224 206 aa15.02■□□□□ -0
SKA3-204ENST00000462482 CTNNA2P26232 953 aa15.02■□□□□ -0
SKA3-204ENST00000462482 MAGEA1P43355 309 aa15.02■□□□□ -0
SKA3-204ENST00000462482 PGDP52209 483 aa15.02■□□□□ -0
SKA3-204ENST00000462482 GSDMDP57764 484 aa15.02■□□□□ -0
SKA3-204ENST00000462482 SEMA5AQ13591 1074 aa15.02■□□□□ -0
SKA3-204ENST00000462482 TAF1AQ15573 450 aaPredicted RBP15.02■□□□□ -0
SKA3-204ENST00000462482 TMEM135Q86UB9 458 aa15.02■□□□□ -0
SKA3-204ENST00000462482 D2HGDHQ8N465 521 aa15.02■□□□□ -0
SKA3-204ENST00000462482 OR2L2Q8NH16 312 aa15.02■□□□□ -0
SKA3-204ENST00000462482 MIB2Q96AX9 1013 aa15.02■□□□□ -0
SKA3-204ENST00000462482 ULK4Q96C45 1275 aa15.02■□□□□ -0
SKA3-204ENST00000462482 INSM2Q96T92 566 aaPredicted RBP15.02■□□□□ -0
SKA3-204ENST00000462482 CCM2Q9BSQ5 444 aa15.02■□□□□ -0
SKA3-204ENST00000462482 FICDQ9BVA6 458 aa15.02■□□□□ -0
SKA3-204ENST00000462482 KIR3DX1Q9H7L2 352 aa15.02■□□□□ -0
SKA3-204ENST00000462482 ACSS2Q9NR19 701 aa15.02■□□□□ -0
SKA3-204ENST00000462482 CRLS1Q9UJA2 301 aa15.02■□□□□ -0
SKA3-204ENST00000462482 FARSAQ9Y285 508 aaKnown RBP15.02■□□□□ -0
SKA3-204ENST00000462482 AAR2Q9Y312 384 aaKnown RBP15.02■□□□□ -0
SKA3-204ENST00000462482 BOD1L1Q8NFC6 3051 aa15.02□□□□□ -0.01
SKA3-204ENST00000462482 MACROD2A1Z1Q3 448 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 C5orf60A6NFR6 353 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 MATN2O00339 956 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 SRP72O76094 671 aaKnown RBP15.01□□□□□ -0.01
SKA3-204ENST00000462482 CRTAMO95727 393 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 POLBP06746 335 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 CDH3P22223 829 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 MLLT10P55197 1068 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 SKOR2Q2VWA4 1001 aaPredicted RBP15.01□□□□□ -0.01
SKA3-204ENST00000462482 FAM199XQ6PEV8 388 aaPredicted RBP15.01□□□□□ -0.01
SKA3-204ENST00000462482 OR4K2Q8NGD2 314 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 HEXDCQ8WVB3 486 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 CPT1BQ92523 772 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 PPP1R2P1Q96PQ5 205 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 SLC25A23Q9BV35 468 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 SLC7A5P2Q9GIP4 190 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 GBA3Q9H227 469 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 SLC24A2Q9UI40 661 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 ARL5AQ9Y689 179 aa15.01□□□□□ -0.01
SKA3-204ENST00000462482 K7EM74 188 aa15□□□□□ -0.01
SKA3-204ENST00000462482 APOC4-APOC2K7ER74 178 aa15□□□□□ -0.01
SKA3-204ENST00000462482 IFRD1O00458 451 aaPredicted RBP15□□□□□ -0.01
SKA3-204ENST00000462482 AGTP01019 485 aa15□□□□□ -0.01
SKA3-204ENST00000462482 APOC2P02655 101 aa15□□□□□ -0.01
SKA3-204ENST00000462482 ITGALP20701 1170 aa15□□□□□ -0.01
SKA3-204ENST00000462482 CETN2P41208 172 aa15□□□□□ -0.01
SKA3-204ENST00000462482 CD97P48960 835 aa15□□□□□ -0.01
SKA3-204ENST00000462482 HADHBP55084 474 aaKnown RBP15□□□□□ -0.01
SKA3-204ENST00000462482 SPA17Q15506 151 aa15□□□□□ -0.01
SKA3-204ENST00000462482 GPR19Q15760 415 aa15□□□□□ -0.01
SKA3-204ENST00000462482 BCL7AQ4VC05 210 aa15□□□□□ -0.01
SKA3-204ENST00000462482 DUS1LQ6P1R4 473 aaKnown RBP15□□□□□ -0.01
SKA3-204ENST00000462482 BBS12Q6ZW61 710 aa15□□□□□ -0.01
SKA3-204ENST00000462482 CDKL3Q8IVW4 592 aaPredicted RBP15□□□□□ -0.01
SKA3-204ENST00000462482 CFAP206Q8IYR0 622 aa15□□□□□ -0.01
SKA3-204ENST00000462482 OR4E2Q8NGC2 313 aa15□□□□□ -0.01
SKA3-204ENST00000462482 HM13Q8TCT9 377 aa15□□□□□ -0.01
SKA3-204ENST00000462482 LCN9Q8WX39 176 aa15□□□□□ -0.01
SKA3-204ENST00000462482 CLIP3Q96DZ5 547 aa15□□□□□ -0.01
SKA3-204ENST00000462482 COPS8Q99627 209 aa15□□□□□ -0.01
SKA3-204ENST00000462482 HEMGNQ9BXL5 484 aa15□□□□□ -0.01
SKA3-204ENST00000462482 SRMSQ9H3Y6 488 aa15□□□□□ -0.01
SKA3-204ENST00000462482 VPS37BQ9H9H4 285 aa15□□□□□ -0.01
SKA3-204ENST00000462482 SYTL2Q9HCH5 934 aa15□□□□□ -0.01
SKA3-204ENST00000462482 LRRC4CQ9HCJ2 640 aa15□□□□□ -0.01
SKA3-204ENST00000462482 LATS2Q9NRM7 1088 aa15□□□□□ -0.01
SKA3-204ENST00000462482 SNX7Q9UNH6 387 aa15□□□□□ -0.01
SKA3-204ENST00000462482 GSAPA4D1B5 854 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 ARGFXA6NJG6 315 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 GAPDHSO14556 408 aaPredicted RBP14.99□□□□□ -0.01
SKA3-204ENST00000462482 ZNF189O75820 626 aaPredicted RBP14.99□□□□□ -0.01
SKA3-204ENST00000462482 DNAJB5O75953 348 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 POLR2CP19387 275 aaPredicted RBP14.99□□□□□ -0.01
SKA3-204ENST00000462482 RBL1P28749 1068 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 HADHAP40939 763 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 ARCN1P48444 511 aaKnown RBP14.99□□□□□ -0.01
SKA3-204ENST00000462482 CCL11P51671 97 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 RPS18P62269 152 aaKnown RBP14.99□□□□□ -0.01
SKA3-204ENST00000462482 ADCY2Q08462 1091 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 PTPRCAPQ14761 206 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 CERS6Q6ZMG9 384 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 DAAM2Q86T65 1068 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 HOOK3Q86VS8 718 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 ACVR1CQ8NER5 493 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 SPDYE1Q8NFV5 336 aaPredicted RBP14.99□□□□□ -0.01
SKA3-204ENST00000462482 ZNF501Q96CX3 271 aaPredicted RBP14.99□□□□□ -0.01
SKA3-204ENST00000462482 LINC00615Q96LM1 132 aaPredicted RBP14.99□□□□□ -0.01
SKA3-204ENST00000462482 FERD3LQ96RJ6 166 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 ING2Q9H160 280 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms