RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 EFEMP1Q12805 493 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 NR6A1Q15406 480 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 NECAB2Q7Z6G3 386 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 FRS2Q8WU20 508 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 ZNF382Q96SR6 550 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 HMG20AQ9NP66 347 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 DNMT3BQ9UBC3 853 aaKnown RBP18.18■□□□□ 0.5
HPS3-204ENST00000462030 GIT1Q9Y2X7 761 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 XPNPEP2O43895 674 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 NDUFS2O75306 463 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 GMNNO75496 209 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 ITIH1P19827 911 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 FSHRP23945 695 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 ALDH4A1P30038 563 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 TMED10P49755 219 aaKnown RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 MRPS6P82932 125 aaKnown RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 RFTN2Q52LD8 501 aaPredicted RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 PRR23BQ6ZRT6 265 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 GPSM1Q86YR5 675 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 NKAPQ8N5F7 415 aaKnown RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 ZNF548Q8NEK5 533 aaPredicted RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 LINGO1Q96FE5 620 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 BTN2A3PQ96KV6 586 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 NSMCE3Q96MG7 304 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 ACTR8Q9H981 624 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 PCDH12Q9NPG4 1184 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 ATAD3AQ9NVI7 634 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 NLE1Q9NVX2 485 aaPredicted RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 ABI2Q9NYB9 513 aaPredicted RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 TSR3Q9UJK0 312 aaKnown RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 TDRD15B5MCY1 1934 aaKnown RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 IGLV3-10A0A075B6K4 115 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 LOC100130705A0A1B0GUX0 176 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 M0QZQ0 153 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 LSM1O15116 133 aaKnown RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 HMBSP08397 361 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 MAPRE1Q15691 268 aaKnown RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 DNAJC14Q6Y2X3 702 aaPredicted RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 CADM3Q8N126 398 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 TTC30BQ8N4P2 665 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 CNIH3Q8TBE1 160 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 METTL6Q8TCB7 284 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 CCDC115Q96NT0 180 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 RBM4BQ9BQ04 359 aaKnown RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 ZBED2Q9BTP6 218 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 TBCDQ9BTW9 1192 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 RBM4Q9BWF3 364 aaKnown RBP18.17■□□□□ 0.5
HPS3-204ENST00000462030 GORASP2Q9H8Y8 452 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 GIN1Q9NXP7 522 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 USE1Q9NZ43 259 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 FBXO10Q9UK96 956 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 NAALAD2Q9Y3Q0 740 aa18.17■□□□□ 0.5
HPS3-204ENST00000462030 HTR3EA5X5Y0 456 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 AQP9O43315 295 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 CNPP09543 421 aaKnown RBP18.16■□□□□ 0.5
HPS3-204ENST00000462030 HOXD12P35452 270 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 LSM3P62310 102 aaKnown RBP18.16■□□□□ 0.5
HPS3-204ENST00000462030 EPS8Q12929 822 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 PSAPL1Q6NUJ1 521 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 PLEKHH3Q7Z736 793 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 MIB1Q86YT6 1006 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 PIANPQ8IYJ0 282 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 THEM5Q8N1Q8 247 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 OR8J3Q8NGG0 315 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 NDNFQ8TB73 568 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 FAR1Q8WVX9 515 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 ITCHQ96J02 903 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 RPRD1AQ96P16 312 aaPredicted RBP18.16■□□□□ 0.5
HPS3-204ENST00000462030 TRIB3Q96RU7 358 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 THUMPD3Q9BV44 507 aaKnown RBP18.16■□□□□ 0.5
HPS3-204ENST00000462030 WDR12Q9GZL7 423 aaKnown RBP18.16■□□□□ 0.5
HPS3-204ENST00000462030 ZNF232Q9UNY5 417 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 FNDC3AQ9Y2H6 1198 aaKnown RBP18.16■□□□□ 0.5
HPS3-204ENST00000462030 DOCK3Q8IZD9 2030 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 ZNF99A8MXY4 864 aaPredicted RBP18.16■□□□□ 0.5
HPS3-204ENST00000462030 PRKD3O94806 890 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 NDST3O95803 873 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 KIAA0040Q15053 153 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 DDR2Q16832 855 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 AP5B1Q2VPB7 878 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 SLC39A12Q504Y0 691 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 CTSL3PQ5NE16 218 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 AFTPHQ6ULP2 937 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 MDGA1Q8NFP4 955 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 ATP13A3Q9H7F0 1226 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 TMEM45AQ9NWC5 275 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 TRMT6Q9UJA5 497 aaKnown RBP18.16■□□□□ 0.5
HPS3-204ENST00000462030 INVSQ9Y283 1065 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 U3KQV3 271 aa18.16■□□□□ 0.5
HPS3-204ENST00000462030 CNOT3O75175 753 aaKnown RBP18.15■□□□□ 0.5
HPS3-204ENST00000462030 VPS26AO75436 327 aa18.15■□□□□ 0.5
HPS3-204ENST00000462030 KATNA1O75449 491 aa18.15■□□□□ 0.5
HPS3-204ENST00000462030 EPOP01588 193 aa18.15■□□□□ 0.5
HPS3-204ENST00000462030 SERPINF2P08697 491 aa18.15■□□□□ 0.5
HPS3-204ENST00000462030 OR1E1P30953 314 aa18.15■□□□□ 0.5
HPS3-204ENST00000462030 EMX1Q04741 257 aaPredicted RBP18.15■□□□□ 0.5
HPS3-204ENST00000462030 CYP4F3Q08477 520 aa18.15■□□□□ 0.5
HPS3-204ENST00000462030 PTGR1Q14914 329 aa18.15■□□□□ 0.5
HPS3-204ENST00000462030 ZNF691Q5VV52 312 aa18.15■□□□□ 0.5
HPS3-204ENST00000462030 SVOPLQ8N434 492 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms