RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 FAM76AQ8TAV0 307 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 GRAPLQ8TC17 118 aaPredicted RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 CENPTQ96BT3 561 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 TBC1D31Q96DN5 1066 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 PABPC5Q96DU9 382 aaKnown RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 KLHL15Q96M94 604 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 FAM210AQ96ND0 272 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 ZNF583Q96ND8 569 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 PCYT2Q99447 389 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 MTERF1Q99551 399 aaKnown RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 RBM4Q9BWF3 364 aaKnown RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 PPP1R14DQ9NXH3 145 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 IKBKGQ9Y6K9 419 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 COL5A3P25940 1745 aaPredicted RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 TJP1Q07157 1748 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 QSER1Q2KHR3 1735 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 C10orf71Q711Q0 1435 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 ANKRD18BA2A2Z9 1011 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 LDLRAD4O15165 306 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 KIF5CO60282 957 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 WDR1O75083 606 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 PAX1P15863 534 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 TNFAIP3P21580 790 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 HOXC13P31276 330 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 KIF5BP33176 963 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 FASLGP48023 281 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 HOXA1P49639 335 aaPredicted RBP4.02□□□□□ -1.77
UBA3-204ENST00000461522 NR0B1P51843 470 aaKnown RBP4.02□□□□□ -1.77
UBA3-204ENST00000461522 SNX16P57768 344 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 ISL1P61371 349 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 ERVK11-1P61568 191 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 TLE2Q04725 743 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 SREBF2Q12772 1141 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 BIRC3Q13489 604 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 GTF2H2Q13888 395 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 TRIM29Q14134 588 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 ZNF234Q14588 700 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 E2F5Q15329 346 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 TMEM30BQ3MIR4 351 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 CCNYL2Q5T2Q4 361 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 PDSS1Q5T2R2 415 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 JAKMIP3Q5VZ66 844 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 GTF2H2CQ6P1K8 395 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 SNX32Q86XE0 403 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 ERC1Q8IUD2 1116 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 ITPRIPQ8IWB1 547 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 OR8H2Q8N162 312 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 KLHDC9Q8NEP7 349 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 F2RL3Q96RI0 385 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 XPO4Q9C0E2 1151 aaKnown RBP4.02□□□□□ -1.77
UBA3-204ENST00000461522 ANKRD2Q9GZV1 360 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 GFRA4Q9GZZ7 299 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 SH3GLB2Q9NR46 395 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 DDX43Q9NXZ2 648 aaKnown RBP4.02□□□□□ -1.77
UBA3-204ENST00000461522 MPP6Q9NZW5 540 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 PGAP2Q9UHJ9 254 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 ATP6V0A2Q9Y487 856 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 TAF1LQ8IZX4 1826 aa4.02□□□□□ -1.77
UBA3-204ENST00000461522 NUP188Q5SRE5 1749 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 MROH5Q6ZUA9 1318 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 UBR3Q6ZT12 1888 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 A0A1W2PQM1 296 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 CTAGE9A4FU28 777 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 TNPO2O14787 897 aaKnown RBP4.01□□□□□ -1.77
UBA3-204ENST00000461522 BAIAP3O94812 1187 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 CCDC159P0C7I6 412 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 CTAGE8P0CG41 777 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 HSD3B1P14060 373 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 CD151P48509 253 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 VAMP2P63027 116 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 EEF1A1P68104 462 aaKnown RBP4.01□□□□□ -1.77
UBA3-204ENST00000461522 SLC9B1Q4ZJI4 515 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 C14orf177Q52M58 125 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 C20orf194Q5TEA3 1177 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 EEF1A1P5Q5VTE0 462 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 FRG2Q64ET8 278 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 MZT2BQ6NZ67 158 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 DUS1LQ6P1R4 473 aaKnown RBP4.01□□□□□ -1.77
UBA3-204ENST00000461522 BRAT1Q6PJG6 821 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 C16orf54Q6UWD8 224 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 PQLC2Q6ZP29 291 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 SLC46A3Q7Z3Q1 461 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 CTAGE4Q8IX94 777 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 ARL10Q8N8L6 244 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 CTCFLQ8NI51 663 aaPredicted RBP4.01□□□□□ -1.77
UBA3-204ENST00000461522 PIGTQ969N2 578 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 ITFG2Q969R8 447 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 RHBDF1Q96CC6 855 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 GCC1Q96CN9 775 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 VMP1Q96GC9 406 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 MAELQ96JY0 434 aaKnown RBP4.01□□□□□ -1.77
UBA3-204ENST00000461522 MPHOSPH8Q99549 860 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 IFIH1Q9BYX4 1025 aaKnown RBP4.01□□□□□ -1.77
UBA3-204ENST00000461522 RWDD1Q9H446 243 aaPredicted RBP4.01□□□□□ -1.77
UBA3-204ENST00000461522 BICC1Q9H694 974 aaKnown RBP4.01□□□□□ -1.77
UBA3-204ENST00000461522 DCTPP1Q9H773 170 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 YY1AP1Q9H869 796 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 RABL2BQ9UNT1 228 aa4.01□□□□□ -1.77
UBA3-204ENST00000461522 CEPT1Q9Y6K0 416 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms