RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 TRIM39Q9HCM9 518 aa7.91□□□□□ -1.14
SFPQ-202ENST00000460428 SARS2Q9NP81 518 aaKnown RBP7.91□□□□□ -1.14
SFPQ-202ENST00000460428 MID1IP1Q9NPA3 183 aa7.91□□□□□ -1.14
SFPQ-202ENST00000460428 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.91□□□□□ -1.141e-9■□□□□ 9.2
SFPQ-202ENST00000460428 CD84Q9UIB8 345 aa7.91□□□□□ -1.14
SFPQ-202ENST00000460428 MBD1Q9UIS9 605 aaPredicted RBP7.91□□□□□ -1.14
SFPQ-202ENST00000460428 ADAMTS6Q9UKP5 1117 aa7.91□□□□□ -1.14
SFPQ-202ENST00000460428 GPR34Q9UPC5 381 aa7.91□□□□□ -1.14
SFPQ-202ENST00000460428 COL4A2P08572 1712 aa7.91□□□□□ -1.14
SFPQ-202ENST00000460428 TCF20Q9UGU0 1960 aaKnown RBP7.91□□□□□ -1.14
SFPQ-202ENST00000460428 CKAP5Q14008 2032 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 A0A1B0GTL3 188 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 A0A1W2PPC1 479 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 SERTM1A2A2V5 107 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 NPIPB8E9PQR5 432 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 K7EPI3 171 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 OR7A17O14581 309 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 VEGFDO43915 354 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 LILRB5O75023 590 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 PSIP1O75475 530 aaKnown RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 RECQL5O94762 991 aaPredicted RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 ATP6V1G2O95670 118 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 ADH1BP00325 375 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 OTCP00480 354 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 ANXA5P08758 320 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 C6P13671 934 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 PCSK2P16519 638 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 HNRNPH1P31943 449 aaKnown RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 DRD3P35462 400 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 P2RY2P41231 377 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 SLC6A12P48065 614 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 RPIAP49247 311 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 METAP1P53582 386 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 FOXA1P55317 472 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 ERVPABLB-1P60509 514 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 PLOD1Q02809 727 aaPredicted RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 GTF2H2Q13888 395 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 PDCD2Q16342 344 aaPredicted RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 PHKG1Q16816 387 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 LRIT3Q3SXY7 679 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 GGTA1PQ4G0N0 100 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 NAIF1Q69YI7 327 aaPredicted RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 GTF2H2CQ6P1K8 395 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 GPRIN3Q6ZVF9 776 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 FRA10AC1Q70Z53 315 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 SPATA19Q7Z5L4 167 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 SYVN1Q86TM6 617 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 PACS2Q86VP3 889 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 RASGEF1AQ8N9B8 481 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 AGR3Q8TD06 166 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 TSPEARQ8WU66 669 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 TWIST2Q8WVJ9 160 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 EZH1Q92800 747 aaPredicted RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 DNASE1L2Q92874 299 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 GLMNQ92990 594 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 ACOX2Q99424 681 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 P2RY13Q9BPV8 354 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 TMEM79Q9BSE2 394 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 SHCBP1LQ9BZQ2 653 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 TUBB1Q9H4B7 451 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 C8orf33Q9H7E9 229 aaPredicted RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 AKTIPQ9H8T0 292 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 CD248Q9HCU0 757 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 DYRK4Q9NR20 520 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 UTP6Q9NYH9 597 aaKnown RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 PDE10AQ9Y233 779 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 ASB1Q9Y576 335 aa7.9□□□□□ -1.14
SFPQ-202ENST00000460428 COPG1Q9Y678 874 aaKnown RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 DNMT3AQ9Y6K1 912 aaPredicted RBP7.9□□□□□ -1.14
SFPQ-202ENST00000460428 A0A088AWK7 358 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 KLHL33A6NCF5 533 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 GPR89AB7ZAQ6 455 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 NEMP1O14524 444 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 LIN7AO14910 233 aaPredicted RBP7.89□□□□□ -1.15
SFPQ-202ENST00000460428 PIP5K1BO14986 540 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 UBDO15205 165 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 CCNT2O60583 730 aaKnown RBP7.89□□□□□ -1.15
SFPQ-202ENST00000460428 RNASEH1O60930 286 aaKnown RBP7.89□□□□□ -1.15
SFPQ-202ENST00000460428 ATG13O75143 517 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 STK16O75716 305 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 S100BP04271 92 aaPredicted RBP7.89□□□□□ -1.15
SFPQ-202ENST00000460428 EPHX1P07099 455 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 EBLN1P0CF75 366 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 GPR89BP0CG08 455 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 GLULP15104 373 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 LBPP18428 481 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 ITGB6P18564 788 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 TSPAN8P19075 237 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 ITGAXP20702 1163 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 CCND1P24385 295 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 PRDX3P30048 256 aaKnown RBP7.89□□□□□ -1.15
SFPQ-202ENST00000460428 AKT1P31749 480 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 PGM1P36871 562 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 PSMD8P48556 350 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 CTSCP53634 463 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 TAS2R38P59533 333 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 RPS14P62263 151 aaKnown RBP7.89□□□□□ -1.15
SFPQ-202ENST00000460428 ZNF33BQ06732 778 aa7.89□□□□□ -1.15
SFPQ-202ENST00000460428 CNTN1Q12860 1018 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms