RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 A0A087WV48 116 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 RRP8O43159 456 aaKnown RBP20.28■□□□□ 0.84
VARS-218ENST00000459667 OR1I1O60431 355 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 GSTM1P09488 218 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 MLNP12872 115 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 PPARGP37231 505 aaPredicted RBP20.28■□□□□ 0.84
VARS-218ENST00000459667 GSTM4Q03013 218 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 SEMA3AQ14563 771 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 ZNF658BQ4V348 819 aaPredicted RBP20.28■□□□□ 0.84
VARS-218ENST00000459667 SNAP47Q5SQN1 464 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 DUS1LQ6P1R4 473 aaKnown RBP20.28■□□□□ 0.84
VARS-218ENST00000459667 CAND1Q86VP6 1230 aaKnown RBP20.28■□□□□ 0.84
VARS-218ENST00000459667 JAMLQ86YT9 394 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 PLXDC1Q8IUK5 500 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 ZNF248Q8NDW4 579 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 MCUQ8NE86 351 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 MFSD3Q96ES6 412 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 XAB2Q9HCS7 855 aaKnown RBP20.28■□□□□ 0.84
VARS-218ENST00000459667 KLHL3Q9UH77 587 aa20.28■□□□□ 0.84
VARS-218ENST00000459667 MN1Q10571 1320 aaPredicted RBP20.27■□□□□ 0.84
VARS-218ENST00000459667 A8MU76 341 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 GOLGA8MH3BSY2 632 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 FANCGO15287 622 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 KRT37O76014 449 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 FTH1P02794 183 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 OR56A5P0C7T3 313 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 CSTF2P33240 577 aaKnown RBP eCLIP20.27■□□□□ 0.84
VARS-218ENST00000459667 ETV5P41161 510 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 CAPZBP47756 277 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 MAPK10P53779 464 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 CAPRIN2Q6IMN6 1127 aaKnown RBP20.27■□□□□ 0.84
VARS-218ENST00000459667 CASC4Q6P4E1 433 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 ZNF449Q6P9G9 518 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 CES3Q6UWW8 571 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 LRRC69Q6ZNQ3 347 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 MPP5Q8N3R9 675 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 AGBL5Q8NDL9 886 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 RSC1A1Q92681 617 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 SLCO2A1Q92959 643 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 SERPINB12Q96P63 405 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 SAMD15Q9P1V8 674 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 MARCH4Q9P2E8 410 aaPredicted RBP20.27■□□□□ 0.84
VARS-218ENST00000459667 ASIC3Q9UHC3 531 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 PCYOX1Q9UHG3 505 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 PCDHGA7Q9Y5G6 932 aa20.27■□□□□ 0.84
VARS-218ENST00000459667 F8W8V4 182 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 CCDC188H7C350 402 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 CD3EAPO15446 510 aaKnown RBP20.26■□□□□ 0.83
VARS-218ENST00000459667 CCL4P13236 92 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 SLC5A2P31639 672 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 GFERP55789 205 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 PTK6Q13882 451 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 PLCL1Q15111 1095 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 ARMC3Q5W041 872 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 SYT10Q6XYQ8 523 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 LDB1Q86U70 411 aaPredicted RBP20.26■□□□□ 0.83
VARS-218ENST00000459667 KLHL7Q8IXQ5 586 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 PPIL6Q8IXY8 311 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 OTUD6BQ8N6M0 293 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 NAT8LQ8N9F0 302 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 HNRNPLLQ8WVV9 542 aaKnown RBP20.26■□□□□ 0.83
VARS-218ENST00000459667 JPH3Q8WXH2 748 aaPredicted RBP20.26■□□□□ 0.83
VARS-218ENST00000459667 ELMO1Q92556 727 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 NAF1Q96HR8 494 aaKnown RBP20.26■□□□□ 0.83
VARS-218ENST00000459667 OR52A5Q9H2C5 316 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 HEBP2Q9Y5Z4 205 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 PKD1L2Q7Z442 2459 aa20.26■□□□□ 0.83
VARS-218ENST00000459667 IFRD1O00458 451 aaPredicted RBP20.25■□□□□ 0.83
VARS-218ENST00000459667 LIN7AO14910 233 aaPredicted RBP20.25■□□□□ 0.83
VARS-218ENST00000459667 CAPN5O15484 640 aaPredicted RBP20.25■□□□□ 0.83
VARS-218ENST00000459667 ZZEF1O43149 2961 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 VAPBO95292 243 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 C9P02748 559 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 PDHA2P29803 388 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 ABCG1P45844 678 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 PREPP48147 710 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 TTPAP49638 278 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 RPA4Q13156 261 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 KRT33BQ14525 404 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 C19orf48Q6RUI8 117 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 ARHGAP22Q7Z5H3 698 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 KCNE4Q8WWG9 221 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 TGM7Q96PF1 710 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 COLEC10Q9Y6Z7 277 aa20.25■□□□□ 0.83
VARS-218ENST00000459667 SDR42E2A6NKP2 422 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 DNALI1O14645 258 aaPredicted RBP20.24■□□□□ 0.83
VARS-218ENST00000459667 NVLO15381 856 aaKnown RBP20.24■□□□□ 0.83
VARS-218ENST00000459667 PRAMEF10O60809 474 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 PAMP19021 973 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 ARNTP27540 789 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 ITPKBP27987 946 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 NDUFS1P28331 727 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 PTGIRP43119 386 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 BOP1Q14137 746 aaKnown RBP20.24■□□□□ 0.83
VARS-218ENST00000459667 SYTL3Q4VX76 610 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 RNASEH2BQ5TBB1 312 aaKnown RBP20.24■□□□□ 0.83
VARS-218ENST00000459667 KIAA0930Q6ICG6 404 aaPredicted RBP20.24■□□□□ 0.83
VARS-218ENST00000459667 KLHL35Q6PF15 583 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 FAM129CQ86XR2 697 aa20.24■□□□□ 0.83
VARS-218ENST00000459667 ZFPM2Q8WW38 1151 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms