RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 NAIF1Q69YI7 327 aaPredicted RBP8.81□□□□□ -1
VPS50-207ENST00000458530 KIAA1161Q6NSJ0 714 aa8.81□□□□□ -1
VPS50-207ENST00000458530 PAQR3Q6TCH7 311 aa8.81□□□□□ -1
VPS50-207ENST00000458530 CCDC121Q6ZUS5 278 aa8.81□□□□□ -1
VPS50-207ENST00000458530 Q6ZVL8 140 aa8.81□□□□□ -1
VPS50-207ENST00000458530 YTHDF3Q7Z739 585 aaKnown RBP8.81□□□□□ -1
VPS50-207ENST00000458530 SIDT2Q8NBJ9 832 aaKnown RBP8.81□□□□□ -1
VPS50-207ENST00000458530 PIWIL2Q8TC59 973 aaKnown RBP8.81□□□□□ -1
VPS50-207ENST00000458530 GANCQ8TET4 914 aa8.81□□□□□ -1
VPS50-207ENST00000458530 BTN2A2Q8WVV5 523 aa8.81□□□□□ -1
VPS50-207ENST00000458530 GLYATL1Q969I3 302 aa8.81□□□□□ -1
VPS50-207ENST00000458530 FAR2Q96K12 515 aa8.81□□□□□ -1
VPS50-207ENST00000458530 ZNF514Q96K75 400 aaPredicted RBP8.81□□□□□ -1
VPS50-207ENST00000458530 CNDP1Q96KN2 507 aa8.81□□□□□ -1
VPS50-207ENST00000458530 ACOX2Q99424 681 aa8.81□□□□□ -1
VPS50-207ENST00000458530 WRAP53Q9BUR4 548 aaKnown RBP8.81□□□□□ -1
VPS50-207ENST00000458530 RIOK2Q9BVS4 552 aaKnown RBP8.81□□□□□ -1
VPS50-207ENST00000458530 DRC3Q9H069 523 aa8.81□□□□□ -1
VPS50-207ENST00000458530 ILKAPQ9H0C8 392 aaPredicted RBP8.81□□□□□ -1
VPS50-207ENST00000458530 ABCG8Q9H221 673 aa8.81□□□□□ -1
VPS50-207ENST00000458530 ALG9Q9H6U8 611 aa8.81□□□□□ -1
VPS50-207ENST00000458530 NPHS2Q9NP85 383 aa8.81□□□□□ -1
VPS50-207ENST00000458530 LATS2Q9NRM7 1088 aa8.81□□□□□ -1
VPS50-207ENST00000458530 KCNK4Q9NYG8 393 aa8.81□□□□□ -1
VPS50-207ENST00000458530 NUDT4Q9NZJ9 180 aa8.81□□□□□ -1
VPS50-207ENST00000458530 CD84Q9UIB8 345 aa8.81□□□□□ -1
VPS50-207ENST00000458530 NCKAP1Q9Y2A7 1128 aa8.81□□□□□ -1
VPS50-207ENST00000458530 STK38LQ9Y2H1 464 aa8.81□□□□□ -1
VPS50-207ENST00000458530 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.81□□□□□ -1
VPS50-207ENST00000458530 FADS3Q9Y5Q0 445 aa8.81□□□□□ -1
VPS50-207ENST00000458530 ITPR1Q14643 2758 aa8.8□□□□□ -1
VPS50-207ENST00000458530 A8MT66 165 aa8.8□□□□□ -1
VPS50-207ENST00000458530 SUPT3HB4E1H0 165 aa8.8□□□□□ -1
VPS50-207ENST00000458530 STX16-NPEPL1H3BU86 382 aa8.8□□□□□ -1
VPS50-207ENST00000458530 BTN3A1O00481 513 aa8.8□□□□□ -1
VPS50-207ENST00000458530 STX16O14662 325 aa8.8□□□□□ -1
VPS50-207ENST00000458530 RAD51BO15315 384 aa8.8□□□□□ -1
VPS50-207ENST00000458530 MID1O15344 667 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ZBTB14O43829 449 aa8.8□□□□□ -1
VPS50-207ENST00000458530 DLX3O60479 287 aa8.8□□□□□ -1
VPS50-207ENST00000458530 DNAJC6O75061 913 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ATG13O75143 517 aa8.8□□□□□ -1
VPS50-207ENST00000458530 SUPT3HO75486 399 aa8.8□□□□□ -1
VPS50-207ENST00000458530 TM7SF2O76062 418 aa8.8□□□□□ -1
VPS50-207ENST00000458530 RECQL5O94762 991 aaPredicted RBP8.8□□□□□ -1
VPS50-207ENST00000458530 TRIM16O95361 564 aa8.8□□□□□ -1
VPS50-207ENST00000458530 EGFP01133 1207 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ZNF806P0C7X5 589 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ACADMP11310 421 aa8.8□□□□□ -1
VPS50-207ENST00000458530 GFAPP14136 432 aa8.8□□□□□ -1
VPS50-207ENST00000458530 NDUFV2P19404 249 aa8.8□□□□□ -1
VPS50-207ENST00000458530 TEAD1P28347 426 aa8.8□□□□□ -1
VPS50-207ENST00000458530 WASP42768 502 aa8.8□□□□□ -1
VPS50-207ENST00000458530 GPR1P46091 355 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ARFIP2P53365 341 aa8.8□□□□□ -1
VPS50-207ENST00000458530 RPS14P62263 151 aaKnown RBP8.8□□□□□ -1
VPS50-207ENST00000458530 GALNT1Q10472 559 aaPredicted RBP8.8□□□□□ -1
VPS50-207ENST00000458530 SIM2Q14190 667 aaPredicted RBP8.8□□□□□ -1
VPS50-207ENST00000458530 LRRC32Q14392 662 aa8.8□□□□□ -1
VPS50-207ENST00000458530 SYTL3Q4VX76 610 aa8.8□□□□□ -1
VPS50-207ENST00000458530 C2orf27AQ580R0 203 aa8.8□□□□□ -1
VPS50-207ENST00000458530 PLEKHS1Q5SXH7 462 aa8.8□□□□□ -1
VPS50-207ENST00000458530 PIP5KL1Q5T9C9 394 aa8.8□□□□□ -1
VPS50-207ENST00000458530 RAET1GQ6H3X3 334 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ZCCHC23Q6ZST2 131 aa8.8□□□□□ -1
VPS50-207ENST00000458530 NEK10Q6ZWH5 1172 aa8.8□□□□□ -1
VPS50-207ENST00000458530 USP30Q70CQ3 517 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ISCA2Q86U28 154 aa8.8□□□□□ -1
VPS50-207ENST00000458530 SFTPA1Q8IWL2 248 aa8.8□□□□□ -1
VPS50-207ENST00000458530 FBXO39Q8N4B4 442 aa8.8□□□□□ -1
VPS50-207ENST00000458530 SPEM1Q8N4L4 309 aa8.8□□□□□ -1
VPS50-207ENST00000458530 HDDC3Q8N4P3 179 aa8.8□□□□□ -1
VPS50-207ENST00000458530 CCNYL1Q8N7R7 359 aa8.8□□□□□ -1
VPS50-207ENST00000458530 IL17RCQ8NAC3 791 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ANKRD49Q8WVL7 239 aa8.8□□□□□ -1
VPS50-207ENST00000458530 FAM3CQ92520 227 aa8.8□□□□□ -1
VPS50-207ENST00000458530 L3HYPDHQ96EM0 354 aa8.8□□□□□ -1
VPS50-207ENST00000458530 TRIM54Q9BYV2 358 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ZDHHC4Q9NPG8 344 aa8.8□□□□□ -1
VPS50-207ENST00000458530 RXFP3Q9NSD7 469 aa8.8□□□□□ -1
VPS50-207ENST00000458530 MRGBPQ9NV56 204 aa8.8□□□□□ -1
VPS50-207ENST00000458530 VTI1BQ9UEU0 232 aa8.8□□□□□ -1
VPS50-207ENST00000458530 FZD4Q9ULV1 537 aa8.8□□□□□ -1
VPS50-207ENST00000458530 APOBEC2Q9Y235 224 aaKnown RBP8.8□□□□□ -1
VPS50-207ENST00000458530 ITM2BQ9Y287 266 aa8.8□□□□□ -1
VPS50-207ENST00000458530 RAP2CQ9Y3L5 183 aa8.8□□□□□ -1
VPS50-207ENST00000458530 TNPO3Q9Y5L0 923 aaKnown RBP8.8□□□□□ -1
VPS50-207ENST00000458530 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
VPS50-207ENST00000458530 AKAP13Q12802 2813 aa8.8□□□□□ -1
VPS50-207ENST00000458530 SDK1Q7Z5N4 2213 aa8.8□□□□□ -1
VPS50-207ENST00000458530 ZFC3H1O60293 1989 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 SMG1Q96Q15 3661 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 HELZ2Q9BYK8 2649 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 A0A0G2JND7 137 aa8.79□□□□□ -1
VPS50-207ENST00000458530 KLHL33A6NCF5 533 aa8.79□□□□□ -1
VPS50-207ENST00000458530 NPEPPSL1A6NEC2 478 aa8.79□□□□□ -1
VPS50-207ENST00000458530 C1QTNF9BB2RNN3 333 aa8.79□□□□□ -1
VPS50-207ENST00000458530 GIPC1O14908 333 aa8.79□□□□□ -1
VPS50-207ENST00000458530 GPR39O43194 453 aa8.79□□□□□ -1
VPS50-207ENST00000458530 SPINT1O43278 529 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms