RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 FNDC8Q8TC99 324 aa16.11■□□□□ 0.17
LSS-205ENST00000457828 PTCD2Q8WV60 388 aaKnown RBP16.11■□□□□ 0.17
LSS-205ENST00000457828 ADGRE2Q9UHX3 823 aa16.11■□□□□ 0.17
LSS-205ENST00000457828 DCLK1O15075 740 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 TUBA4AP68366 448 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 GRSF1Q12849 480 aaKnown RBP eCLIP16.1■□□□□ 0.17
LSS-205ENST00000457828 LCP2Q13094 533 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 SYTL1Q8IYJ3 562 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 METTL25Q8N6Q8 603 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 ZNF366Q8N895 744 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 PLEKHA8Q96JA3 519 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 RERGLQ9H628 205 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 TMEM247A6NEH6 219 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 HOXB8P17481 243 aaPredicted RBP16.1■□□□□ 0.17
LSS-205ENST00000457828 ARRB2P32121 409 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 MAGEA3P43357 314 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 TRPV3Q8NET8 790 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 GPR21Q99679 349 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 TMLHEQ9NVH6 421 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 DZANK1Q9NVP4 752 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 ZNHIT2Q9UHR6 403 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 TPRKBQ9Y3C4 175 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 PCDHGA7Q9Y5G6 932 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 CDK5RAP2Q96SN8 1893 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 LOC100506127A0A0U1RQW1 187 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 H3BQ06 376 aaPredicted RBP16.1■□□□□ 0.17
LSS-205ENST00000457828 MLYCDO95822 493 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 OR56A5P0C7T3 313 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 HOXD8P13378 290 aaPredicted RBP16.1■□□□□ 0.17
LSS-205ENST00000457828 NTHL1P78549 312 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 HSPA14Q0VDF9 509 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 RFTN1Q14699 578 aaPredicted RBP16.1■□□□□ 0.17
LSS-205ENST00000457828 PDE12Q6L8Q7 609 aaKnown RBP16.1■□□□□ 0.17
LSS-205ENST00000457828 LINGO1Q96FE5 620 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 IMPAD1Q9NX62 359 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 KCTD3Q9Y597 815 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 RAI2Q9Y5P3 530 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 C7orf72A4D263 438 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 SH3BGRLO75368 114 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 GOT2P00505 430 aaKnown RBP16.1■□□□□ 0.17
LSS-205ENST00000457828 PABPC1P11940 636 aaKnown RBP16.1■□□□□ 0.17
LSS-205ENST00000457828 ALOX12P18054 663 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 LPOP22079 712 aaPredicted RBP16.1■□□□□ 0.17
LSS-205ENST00000457828 HTR7P34969 479 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 MAGEA10P43363 369 aaPredicted RBP16.1■□□□□ 0.17
LSS-205ENST00000457828 DIO3P55073 304 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 LY6G5CQ5SRR4 150 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 CEP68Q76N32 757 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 DET1Q7L5Y6 550 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 OR14C36Q8NHC7 312 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 TBC1D30Q9Y2I9 924 aa16.1■□□□□ 0.17
LSS-205ENST00000457828 OR4F21O95013 312 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 FTH1P02794 183 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 GNAO1P09471 354 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 EPCAMP16422 314 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 DEFA1P59665 94 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 DEFA3P59666 94 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 PTPRCAPQ14761 206 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 GPRIN1Q7Z2K8 1008 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 TAGAPQ8N103 731 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 MYO19Q96H55 970 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 SLC25A51Q9H1U9 297 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 SMOC2Q9H3U7 446 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.09■□□□□ 0.172e-6■□□□□ 10.2
LSS-205ENST00000457828 MAGEL2Q9UJ55 1249 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 PCDHGB4Q9UN71 923 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 A0A1B0GTW7 788 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 LRRC14BA6NHZ5 514 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 SNAP29O95721 258 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 CD68P34810 354 aaPredicted RBP16.09■□□□□ 0.17
LSS-205ENST00000457828 CSKP41240 450 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 HERVK_113P63132 956 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 RAB33AQ14088 237 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 ZNF540Q8NDQ6 660 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 OR4K2Q8NGD2 314 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 PHOSPHO2Q8TCD6 241 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 GAB3Q8WWW8 586 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 TPD52L3Q96J77 140 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 SPATA17Q96L03 361 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 ERVK-6Q9BXR3 956 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 PAK6Q9NQU5 681 aaPredicted RBP16.09■□□□□ 0.17
LSS-205ENST00000457828 RAB23Q9ULC3 237 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 FGF1P05230 155 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 HLA-DPA1P20036 260 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 LRRC74AQ0VAA2 488 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 PDGFRLQ15198 375 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 ATXN7L2Q5T6C5 722 aaPredicted RBP16.09■□□□□ 0.17
LSS-205ENST00000457828 RNF111Q6ZNA4 994 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 TAS1R1Q7RTX1 841 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 NKAPQ8N5F7 415 aaKnown RBP16.09■□□□□ 0.17
LSS-205ENST00000457828 UTP15Q8TED0 518 aaKnown RBP16.09■□□□□ 0.17
LSS-205ENST00000457828 ELOVL6Q9H5J4 265 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 PCDHGB5Q9Y5G0 923 aa16.09■□□□□ 0.17
LSS-205ENST00000457828 AGRPO00253 132 aa16.08■□□□□ 0.17
LSS-205ENST00000457828 COCHO43405 550 aa16.08■□□□□ 0.17
LSS-205ENST00000457828 ZNF37AP17032 561 aaPredicted RBP16.08■□□□□ 0.17
LSS-205ENST00000457828 CAMK2GQ13555 558 aaPredicted RBP16.08■□□□□ 0.17
LSS-205ENST00000457828 CYP4V2Q6ZWL3 525 aaPredicted RBP16.08■□□□□ 0.17
LSS-205ENST00000457828 ANKRD33Q7Z3H0 272 aa16.08■□□□□ 0.17
LSS-205ENST00000457828 OR13C4Q8NGS5 318 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms