RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 SPON1Q9HCB6 807 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 SMURF1Q9HCE7 757 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 CUEDC1Q9NWM3 386 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-203ENST00000456367 MCUBQ9NWR8 336 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 TRPC4Q9UBN4 977 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 HCN2Q9UL51 889 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 CDH7Q9ULB5 785 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 LRFN2Q9ULH4 789 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 TNFSF13BQ9Y275 285 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 CRYL1Q9Y2S2 319 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 PCDHB3Q9Y5E6 796 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 UBIAD1Q9Y5Z9 338 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 ALG5Q9Y673 324 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 MRC1P22897 1456 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 PRSS51A0A1B0GVH4 220 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 ANKRD34BA5PLL1 514 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 GRXCR2A6NFK2 248 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 PIP5K1BO14986 540 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 BUD23O43709 281 aaKnown RBP4.94□□□□□ -1.62
PCDH9-203ENST00000456367 ZBTB14O43829 449 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 HLA-DPB1P04440 258 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 CXCL8P10145 99 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 NCK1P16333 377 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 GOT1P17174 413 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 BMP7P18075 431 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 NOS3P29474 1203 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 AXLP30530 894 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 ETV4P43268 484 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 HNMTP50135 292 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 PNLIPRP1P54315 467 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 CXCR4P61073 352 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 IRF8Q02556 426 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 SPP2Q13103 211 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 RPA4Q13156 261 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 PGM5Q15124 567 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 PTGES3Q15185 160 aaKnown RBP4.94□□□□□ -1.62
PCDH9-203ENST00000456367 PCBP1Q15365 356 aaKnown RBP eCLIP4.94□□□□□ -1.62
PCDH9-203ENST00000456367 RABL3Q5HYI8 236 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 SH3PXD2AQ5TCZ1 1133 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 FAM196AQ6ZSG2 479 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 FAM220AQ7Z4H9 259 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 TMEM86AQ8N2M4 240 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 TOMM5Q8N4H5 51 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 OR8J3Q8NGG0 315 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 OR4L1Q8NH43 312 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 KAT2AQ92830 837 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 MYRFLQ96LU7 910 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 ALPK1Q96QP1 1244 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 RETREG1Q9H6L5 497 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 OR12D3Q9UGF7 316 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 PCDHGB1Q9Y5G3 927 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 SPACA6W5XKT8 324 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 QSOX1O00391 747 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SLC9A3R1O14745 358 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 NOBOXO60393 691 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 B4GALT4O60513 344 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 RFPL3O75679 317 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 LDOC1O95751 146 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 BMP1P13497 986 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PTPN2P17706 415 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TRIM23P36406 574 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CLK2P49760 499 aaKnown RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GDF10P55107 478 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PRKCDQ05655 676 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ABHD18Q0P651 414 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ORC1Q13415 861 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CLCA4Q14CN2 919 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TOMM20Q15388 145 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 PTPRNQ16849 979 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CCDC58Q4VC31 144 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SEZ6Q53EL9 994 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 BRMS1LQ5PSV4 323 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 DHRS4L2Q6PKH6 230 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 TFAP2DQ7Z6R9 452 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 FAM35AQ86V20 835 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CARM1Q86X55 608 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GALNT13Q8IUC8 556 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GPALPP1Q8IXQ4 340 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 METTL25Q8N6Q8 603 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 OR10A6Q8NH74 314 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ANGPTL6Q8NI99 470 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CYP2W1Q8TAV3 490 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GTF3C2Q8WUA4 911 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 STYXQ8WUJ0 223 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CELF6Q96J87 481 aaKnown RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 MAELQ96JY0 434 aaKnown RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 CHMP1AQ9HD42 196 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 FARSBQ9NSD9 589 aaKnown RBP4.93□□□□□ -1.62
PCDH9-203ENST00000456367 RPS6KB2Q9UBS0 482 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 RIMS3Q9UJD0 308 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 EDARQ9UNE0 448 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 DERAQ9Y315 318 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 MYO5BQ9ULV0 1848 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 MYH8P13535 1937 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 AGAP5A6NIR3 686 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 STX16-NPEPL1H3BU86 382 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 GABRDO14764 452 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 SLC28A2O43868 658 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 XPNPEP2O43895 674 aa4.93□□□□□ -1.62
PCDH9-203ENST00000456367 ARHGEF15O94989 841 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms