RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 GOLGA6L1Q8N7Z2 621 aa16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 ANKRD49Q8WVL7 239 aa16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 GLMNQ92990 594 aa16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 ATP6V1G3Q96LB4 118 aa16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 TCEAL2Q9H3H9 227 aaPredicted RBP16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 CAPN10Q9HC96 672 aa16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 MKS1Q9NXB0 559 aa16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 SMG5Q9UPR3 1016 aaKnown RBP16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 ACOT9Q9Y305 439 aa16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 ST14Q9Y5Y6 855 aa16.28■□□□□ 0.2
CCDC90B-202ENST00000455220 COL6A2P12110 1019 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 ENO3P13929 434 aaPredicted RBP16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 VCLP18206 1134 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 HSPA14Q0VDF9 509 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 RPA4Q13156 261 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 NFE2L1Q14494 772 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 KIF19Q2TAC6 998 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 ZNF542PQ5EBM4 170 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 ACSBG2Q5FVE4 666 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 METRNLQ641Q3 311 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 SLC23A3Q6PIS1 610 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 CFAP206Q8IYR0 622 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 CENPLQ8N0S6 344 aaPredicted RBP16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 GPBAR1Q8TDU6 330 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 PDLIM5Q96HC4 596 aaKnown RBP16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 TMEM168Q9H0V1 697 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 VPS11Q9H270 941 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 DPEP2Q9H4A9 486 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 KLC4Q9NSK0 619 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 PCMTD2Q9NV79 361 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 DNAJC28Q9NX36 388 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 RAB23Q9ULC3 237 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 NOVA2Q9UNW9 492 aaKnown RBP16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 PLEKHM1Q9Y4G2 1056 aa16.27■□□□□ 0.2
CCDC90B-202ENST00000455220 MUC6Q6W4X9 2439 aa16.27■□□□□ 0.19
CCDC90B-202ENST00000455220 PCDH15Q96QU1 1955 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 GOLGA8RI6L899 631 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 JUNDP17535 347 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 DGKAP23743 735 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 GMPRP36959 345 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 IL2P60568 153 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 IRF9Q00978 393 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 CTBSQ01459 385 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 DLG1Q12959 904 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 SYTL3Q4VX76 610 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 LAIR1Q6GTX8 287 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 LRRC8EQ6NSJ5 796 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 NEK10Q6ZWH5 1172 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 TBC1D1Q86TI0 1168 aaPredicted RBP16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 LCA5Q86VQ0 697 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 VRK3Q8IV63 474 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 SLC22A15Q8IZD6 547 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 C4orf33Q8N1A6 199 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 EEF1AKMT1Q8WVE0 214 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 TMEM159Q96B96 161 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 ALKBH8Q96BT7 664 aaKnown RBP16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 SLC13A1Q9BZW2 595 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 DERL2Q9GZP9 239 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 IRF2BPLQ9H1B7 796 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 KCNH6Q9H252 994 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 SSU72Q9NP77 194 aaKnown RBP16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 IGSF5Q9NSI5 407 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 APOBEC3BQ9UH17 382 aaKnown RBP16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 KCNK6Q9Y257 313 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 DNAJC16Q9Y2G8 782 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 SNX11Q9Y5W9 270 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 LAMA1P25391 3075 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 HMGB1P1B2RPK0 211 aaPredicted RBP16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 SCAMP1O15126 338 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 KLHL2O95198 593 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 CCDC166P0CW27 439 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 CREB1P16220 341 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 MPLP40238 635 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 PREPP48147 710 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 RXRGP48443 463 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 RGS4P49798 205 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 ILF3Q12906 894 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 CYHR1Q6ZMK1 362 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 NRROSQ86YC3 692 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 PLD6Q8N2A8 252 aaKnown RBP16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 BANPQ8N9N5 519 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 SUMF1Q8NBK3 374 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 CCL4L1Q8NHW4 92 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 LINGO1Q96FE5 620 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 GPR78Q96P69 363 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 SMC6Q96SB8 1091 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 LRRC61Q9BV99 259 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 OR52A5Q9H2C5 316 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 CAAP1Q9H8G2 361 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 MED4Q9NPJ6 270 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 FAM8A1Q9UBU6 413 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 ACSL5Q9ULC5 683 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 SLC6A14Q9UN76 642 aa16.26■□□□□ 0.19
CCDC90B-202ENST00000455220 TDRD6O60522 2096 aaKnown RBP16.25■□□□□ 0.19
CCDC90B-202ENST00000455220 TMEM131Q92545 1883 aa16.25■□□□□ 0.19
CCDC90B-202ENST00000455220 H3BM21 787 aa16.25■□□□□ 0.19
CCDC90B-202ENST00000455220 CFIP05156 583 aa16.25■□□□□ 0.19
CCDC90B-202ENST00000455220 GSTA1P08263 222 aa16.25■□□□□ 0.19
CCDC90B-202ENST00000455220 LTA4HP09960 611 aaKnown RBP16.25■□□□□ 0.19
CCDC90B-202ENST00000455220 MPC1LP0DKB6 136 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms