RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CREB5Q02930 508 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 TAF12Q16514 161 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 ZCCHC8Q6NZY4 707 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 ZNF621Q6ZSS3 439 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 CHDHQ8NE62 594 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 TANKQ92844 425 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 GPR63Q9BZJ6 419 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 ABCC13Q9NSE7 274 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 AIG1Q9NVV5 245 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 IMPAD1Q9NX62 359 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 A0A0U1RQS6 177 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 A0A1W2PQH9 124 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 SULT1C4O75897 302 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 MT-ND2P03891 347 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 ENO2P09104 434 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 TGFBR1P36897 503 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 NUDT6P53370 316 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 RAPSNQ13702 412 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 ARMC4Q5T2S8 1044 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 UBE2J2Q8N2K1 259 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 SPPL2AQ8TCT8 520 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 C17orf50Q8WW18 174 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 KCTD13Q8WZ19 329 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 CSF3RQ99062 836 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 SH3GL1Q99961 368 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 CINPQ9BW66 212 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 ATP13A3Q9H7F0 1226 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 KAT8Q9H7Z6 458 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 KRT84Q9NSB2 600 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 UTS2RQ9UKP6 389 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 PCDHA9Q9Y5H5 950 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 SLC22A1O15245 554 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 CAPN15O75808 1086 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 RPP40O75818 363 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 S100A3P33764 101 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 GDF5P43026 501 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 C18orf21Q32NC0 220 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 SPANXN4Q5MJ08 99 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 GPR153Q6NV75 609 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 ZNF549Q6P9A3 640 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 PLEKHG7Q6ZR37 379 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 ARMCX6Q7L4S7 300 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 ZDHHC21Q8IVQ6 265 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 AMER2Q8N7J2 671 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 RTL3Q8N8U3 475 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 PIK3C3Q8NEB9 887 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 GPRC5AQ8NFJ5 357 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 SLC13A3Q8WWT9 602 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 TRIM62Q9BVG3 475 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 FAM124BQ9H5Z6 455 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 SARDHQ9UL12 918 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 CBX4O00257 560 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 IRAK2O43187 625 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 CHRNA1P02708 482 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 ABCB1P08183 1280 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 AFF1P51825 1210 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 ZNF135P52742 658 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 SMN1Q16637 294 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 ARRDC4Q8NCT1 418 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 ZMIZ2Q8NF64 920 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 PPTC7Q8NI37 304 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 ITPKCQ96DU7 683 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 PAAF1Q9BRP4 392 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 TPK1Q9H3S4 243 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 MFSD1Q9H3U5 465 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 IPPKQ9H8X2 491 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 TREX1Q9NSU2 369 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 GJD2Q9UKL4 321 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 BTBD3Q9Y2F9 522 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 GPR45Q9Y5Y3 372 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 PCNTO95613 3336 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 CYP11A1P05108 521 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 BMP4P12644 408 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 HTR1EP28566 365 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 AXLP30530 894 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 TMEM40Q8WWA1 233 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 SMIM14Q96QK8 99 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 SEC14L2O76054 403 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 ALPLP05186 524 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 CCDC159P0C7I6 412 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 EMX1Q04741 257 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 FOXM1Q08050 763 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 SLC39A12Q504Y0 691 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 ATAD3BQ5T9A4 648 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 KIAA0319Q5VV43 1072 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 RASAL3Q86YV0 1011 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 HIPK1Q86Z02 1210 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 ARHGAP12Q8IWW6 846 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 NKAPQ8N5F7 415 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 TTC29Q8NA56 475 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 OR13J1Q8NGT2 312 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 UBASH3BQ8TF42 649 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 EEF1AKMT1Q8WVE0 214 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 LGALS12Q96DT0 336 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 CAMKK2Q96RR4 588 aa13.66□□□□□ -0.22
UBE2D3-210ENST00000453744 NBNO60934 754 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 WDR47O94967 919 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 LCKP06239 509 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 COL6A1P12109 1028 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms