RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 OR2T11Q8NH01 316 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 OMA1Q96E52 524 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 ARSGQ96EG1 525 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 KIF1BPQ96EK5 621 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 NR1H4Q96RI1 486 aaPredicted RBP1.87□□□□□ -2.11
LRCH3-209ENST00000452660 GAL3ST4Q96RP7 486 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 FUCA2Q9BTY2 467 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 RPP25Q9BUL9 199 aaKnown RBP1.87□□□□□ -2.11
LRCH3-209ENST00000452660 PELI2Q9HAT8 420 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 COPG2Q9UBF2 871 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 CLIP2Q9UDT6 1046 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 EPHA6Q9UF33 1036 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 ATAD2BQ9ULI0 1458 aa1.87□□□□□ -2.11
LRCH3-209ENST00000452660 SOS1Q07889 1333 aaPredicted RBP1.87□□□□□ -2.11
LRCH3-209ENST00000452660 URB2Q14146 1524 aaKnown RBP1.86□□□□□ -2.11
LRCH3-209ENST00000452660 CLASP1Q7Z460 1538 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 MEX3AA1L020 520 aaKnown RBP1.86□□□□□ -2.11
LRCH3-209ENST00000452660 MSGN1A6NI15 193 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 OR6C76A6NM76 312 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 HCRTR2O43614 444 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 SLC25A12O75746 678 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 IGHV3-13P01766 116 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 ICAM1P05362 532 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 KRT19P08727 400 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 ACADMP11310 421 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 HSD3B1P14060 373 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 ITIH1P19827 911 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 CA6P23280 308 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 PIK3CAP42336 1068 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 CTCFP49711 727 aaPredicted RBP1.86□□□□□ -2.11
LRCH3-209ENST00000452660 LIMK2P53671 638 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 RPS18P62269 152 aaKnown RBP1.86□□□□□ -2.11
LRCH3-209ENST00000452660 CYCSP99999 105 aaKnown RBP1.86□□□□□ -2.11
LRCH3-209ENST00000452660 CDR2Q01850 454 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 LGALS3BPQ08380 585 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 KCNC3Q14003 757 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 DPCR1Q3MIW9 517 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 GPRIN3Q6ZVF9 776 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 ZNF534Q76KX8 674 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 ZNF554Q86TJ5 538 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 ZNF584Q8IVC4 421 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 RAB42Q8N4Z0 105 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.86□□□□□ -2.11
LRCH3-209ENST00000452660 TMEM178AQ8NBL3 297 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 ZPLD1Q8TCW7 415 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 HSD17B8Q92506 261 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 SLCO2A1Q92959 643 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 TRIM63Q969Q1 353 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 EGLN2Q96KS0 407 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 UPF3AQ9H1J1 476 aaKnown RBP1.86□□□□□ -2.11
LRCH3-209ENST00000452660 MTMR10Q9NXD2 777 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 FBXL17Q9UF56 701 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 TUBE1Q9UJT0 475 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 LAS1LQ9Y4W2 734 aaKnown RBP1.86□□□□□ -2.11
LRCH3-209ENST00000452660 CEP164Q9UPV0 1460 aa1.86□□□□□ -2.11
LRCH3-209ENST00000452660 DIP2BQ9P265 1576 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 COL16A1Q07092 1604 aaPredicted RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 HCFC1P51610 2035 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 EIF3CLB5ME19 914 aaKnown RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 ATP2A1O14983 1001 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 ZNF217O75362 1048 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 NKX2-2O95096 273 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 F9P00740 461 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 HIST1H2ABP04908 130 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 CKMT2P17540 419 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 HIST1H2ADP20671 130 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 HRH2P25021 359 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 PAFAH1B1P43034 410 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 DLK1P80370 383 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 TRPC3Q13507 836 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 TDGQ13569 410 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 FASTKD3Q14CZ7 662 aaKnown RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 RRS1Q15050 365 aaKnown RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 NECTIN1Q15223 517 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 HIGD2BQ4VC39 106 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 PDLIM3Q53GG5 364 aaPredicted RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 FAM166AQ6J272 317 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 TSSK4Q6SA08 328 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 IL27RAQ6UWB1 636 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 DENND5BQ6ZUT9 1274 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 HIST3H2AQ7L7L0 130 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 SDCCAG8Q86SQ7 713 aaPredicted RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 TBC1D1Q86TI0 1168 aaPredicted RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 DCLK2Q8N568 766 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 PPFIBP2Q8ND30 876 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 MMABQ96EY8 250 aaPredicted RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 UBXN10Q96LJ8 280 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 DACH2Q96NX9 599 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 SLC22A12Q96S37 553 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 GFI1Q99684 422 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 DENND2DQ9H6A0 471 aaPredicted RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 INTS9Q9NV88 658 aaKnown RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 PRO0461Q9UI25 63 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 CAPN7Q9Y6W3 813 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 AQRO60306 1485 aaKnown RBP eCLIP1.85□□□□□ -2.112e-6■■□□□ 13.9
LRCH3-209ENST00000452660 SNAPC4Q5SXM2 1469 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 ARHGEF40Q8TER5 1519 aa1.85□□□□□ -2.11
LRCH3-209ENST00000452660 PCF11O94913 1555 aaKnown RBP1.85□□□□□ -2.11
LRCH3-209ENST00000452660 KIF21BO75037 1637 aa1.84□□□□□ -2.11
LRCH3-209ENST00000452660 ABCC10Q5T3U5 1492 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms