RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 GLCEO94923 617 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 LGI1O95970 557 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 LINGO3P0C6S8 592 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CYP11B2P19099 503 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 DRD4P21917 467 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 EEF1B2P24534 225 aaKnown RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 RPL13P26373 211 aaKnown RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 AKT2P31751 481 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 UQCRC1P31930 480 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDAP32320 146 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CHRNA7P36544 502 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 ADCY8P40145 1251 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 HTR2BP41595 481 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC6A12P48065 614 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 ENTPD1P49961 510 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 OAZ1P54368 228 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 LOXL3P58215 753 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 TCF15Q12870 199 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CCNIQ14094 377 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 STILQ15468 1287 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 SMN1Q16637 294 aaKnown RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 UGCGQ16739 394 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDO1Q16878 200 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 KRT24Q2M2I5 525 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 VWC2Q2TAL6 325 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 EDRF1Q3B7T1 1238 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 GXYLT1Q4G148 440 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM41BQ5BJD5 291 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 FAM47AQ5JRC9 791 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 PHYHD1Q5SRE7 291 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 C9orf50Q5SZB4 431 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CERCAMQ5T4B2 595 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 SERTAD4-AS1Q5TG53 156 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 TBC1D9BQ66K14 1250 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR7E24Q6IFN5 339 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 PODNL1Q6PEZ8 512 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 TRIM74Q86UV6 250 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 TRIM73Q86UV7 250 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 STK32CQ86UX6 486 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 FOXP4Q8IVH2 680 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 ARID3BQ8IVW6 561 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZDHHC14Q8IZN3 488 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 AMER2Q8N7J2 671 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 NECAB1Q8N987 351 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 FADS6Q8N9I5 356 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 PDPRQ8NCN5 879 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 DNAAF1Q8NEP3 725 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 BPIFCQ8NFQ6 507 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CLHC1Q8NHS4 586 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 FAM110DQ8TAY7 271 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CAGE1Q8TC20 777 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 HDAC7Q8WUI4 952 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 NSMAFQ92636 917 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 FCGR1BQ92637 280 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 NKD2Q969F2 451 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 ISG20Q96AZ6 181 aaKnown RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 SNRNP40Q96DI7 357 aaKnown RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 PABPC5Q96DU9 382 aaKnown RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 LINGO1Q96FE5 620 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 C16orf58Q96GQ5 468 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 MAGED4Q96JG8 741 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 RPL10LQ96L21 214 aaKnown RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZSWIM3Q96MP5 696 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 KLHL32Q96NJ5 620 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 ANKRD27Q96NW4 1050 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 RPRD1AQ96P16 312 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 PANX2Q96RD6 677 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 PCDHB18PQ96TA0 734 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDT1Q9H211 546 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLCO5A1Q9H2Y9 848 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 UBQLN3Q9H347 655 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 DCTPP1Q9H773 170 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CXorf36Q9H7Y0 433 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 GPR108Q9NPR9 543 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 KLHL1Q9NR64 748 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 PTGFRNQ9P2B2 879 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 RBPJLQ9UBG7 517 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 ARPP21Q9UBL0 812 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CTNNAL1Q9UBT7 734 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 CHRNA9Q9UGM1 479 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 HACL1Q9UJ83 578 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC25A13Q9UJS0 675 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 MGAT4BQ9UQ53 548 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 SPATA31A3Q5VYP0 1347 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 KIAA1217Q5T5P2 1943 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 PTCH1Q13635 1447 aa4.36□□□□□ -1.71
HMGB3P21-201ENST00000452483 A0A0U1RQJ8 604 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 TTC26A0AVF1 554 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDHR4A6H8M9 788 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 BTBD17A6NE02 478 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 CTDSPLO15194 276 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 OGTO15294 1046 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 CHADO15335 359 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 DCXO43602 365 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 EXTL3O43909 919 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 KCNJ13O60928 360 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF202O95125 648 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 AMHP03971 560 aa4.35□□□□□ -1.71
HMGB3P21-201ENST00000452483 ALDOAP04075 364 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms