RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 NCSTNQ92542 709 aa15.75■□□□□ 0.11
SCAMP4-205ENST00000452128 COG4Q9H9E3 785 aa15.75■□□□□ 0.11
SCAMP4-205ENST00000452128 SYBUQ9NX95 663 aa15.75■□□□□ 0.11
SCAMP4-205ENST00000452128 BFARQ9NZS9 450 aa15.75■□□□□ 0.11
SCAMP4-205ENST00000452128 SOX13Q9UN79 622 aa15.75■□□□□ 0.11
SCAMP4-205ENST00000452128 PCDHGA3Q9Y5H0 932 aa15.75■□□□□ 0.11
SCAMP4-205ENST00000452128 SLC5A10A0PJK1 596 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 UBXN7O94888 489 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 ANKRD34CP0C6C1 535 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 ACADLP28330 430 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 PBLDP30039 288 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 VPS41P49754 854 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 GFERP55789 205 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 TLE3Q04726 772 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 RPA4Q13156 261 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 LYPLAL1Q5VWZ2 237 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 DTX1Q86Y01 620 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 SPACA3Q8IXA5 215 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 ZNF248Q8NDW4 579 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 HNRNPLLQ8WVV9 542 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 RSC1A1Q92681 617 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 PMEPA1Q969W9 287 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 CXorf40BQ96DE9 158 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 MFSD3Q96ES6 412 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 STN1Q9H668 368 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 OCIAD1Q9NX40 245 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 PISDQ9UG56 409 aa15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCAMP4-205ENST00000452128 B4E171 279 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 BHMG1C9JSJ3 638 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 POLBP06746 335 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 TYRP1P17643 537 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 TSPAN7P41732 249 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 HALP42357 657 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 CD151P48509 253 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 PCBP4P57723 403 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 RNASEH2BQ5TBB1 312 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 C19orf48Q6RUI8 117 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 TMEM135Q86UB9 458 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 PLXDC1Q8IUK5 500 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 AGBL5Q8NDL9 886 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 PPHLN1Q8NEY8 458 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 OR6P1Q8NGX9 317 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 USP7Q93009 1102 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 AHCYL2Q96HN2 611 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 SIGLEC10Q96LC7 697 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 C9orf72Q96LT7 481 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 FCRL3Q96P31 734 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 DPH1Q9BZG8 443 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 DDX47Q9H0S4 455 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 P2RY12Q9H244 342 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 KIR3DX1Q9H7L2 352 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 SIDT1Q9NXL6 827 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 FOXJ2Q9P0K8 574 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 SLC24A2Q9UI40 661 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 CDYLQ9Y232 598 aa15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 CFAP20Q9Y6A4 193 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-205ENST00000452128 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 TP73O15350 636 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 TOX3O15405 576 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 EFSO43281 561 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 PRAMEF10O60809 474 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 CAPZBP47756 277 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 LEPRP48357 1165 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 MC2RQ01718 297 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 CCDC173Q0VFZ6 552 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 CLN3Q13286 438 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 COL28A1Q2UY09 1125 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 DUS1LQ6P1R4 473 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 CES3Q6UWW8 571 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 LDB1Q86U70 411 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 TRIM48Q8IWZ4 208 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 SNRNP27Q8WVK2 155 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 KLHL6Q8WZ60 621 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 CRELD1Q96HD1 420 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 C12orf66Q96MD2 445 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 SERPINB12Q96P63 405 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 NAPGQ99747 312 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 TRIM56Q9BRZ2 755 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 PRORYQ9H606 182 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 SAR1BQ9Y6B6 198 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 IGSF10Q6WRI0 2623 aa15.72■□□□□ 0.11
SCAMP4-205ENST00000452128 PIKFYVEQ9Y2I7 2098 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 ZCWPW2A0A1B0GU75 182 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 FAM237BA0A1B0GVD1 139 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 CD3EAPO15446 510 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 CAPN5O15484 640 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 KIF1CO43896 1103 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 GPC4O75487 556 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 JMJD7P0C870 316 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 TPBGLP0DKB5 382 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 CCR7P32248 378 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 PREPP48147 710 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 PPP1CAP62136 330 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 PRAMEP78395 509 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 PTK6Q13882 451 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 BOP1Q14137 746 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 TYSND1Q2T9J0 566 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 FOXR1Q6PIV2 292 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 PRSS42Q7Z5A4 293 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms