RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 GON7Q9BXV9 100 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 TEKT2Q9UIF3 430 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 MAGED2Q9UNF1 606 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 AP3D1O14617 1153 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 SEMA3DO95025 777 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 GPIP06744 558 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 CBLP22681 906 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 HTR7P34969 479 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 PKN3Q6P5Z2 889 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 BHLHA9Q7RTU4 235 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 C8orf59Q8N0T1 100 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 FSD1LQ9BXM9 530 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 KCNN2Q9H2S1 579 aa13.29□□□□□ -0.28
SYNGAP1-204ENST00000449372 CLDN5O00501 218 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC4A1P02730 911 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ARPP19P56211 112 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 CACNB2Q08289 660 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 RAB41Q5JT25 222 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 NXNL2Q5VZ03 156 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 TIGD7Q6NT04 549 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ADGRG5Q8IZF4 528 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 MYRFLQ96LU7 910 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 NODALQ96S42 347 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 RTP3Q9BQQ7 232 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ACTR3BQ9P1U1 418 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ARL5CA6NH57 179 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 HHLA1C9JL84 531 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC9A3R1O14745 358 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 UMPSP11172 480 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 NPR3P17342 541 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ERCC2P18074 760 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 CYP2A7P20853 494 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 CST5P28325 142 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC26A3P40879 764 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 GRM3Q14832 879 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ACAP2Q15057 778 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 P2RY8Q86VZ1 359 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ZC3HC1Q86WB0 502 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 KCTD4Q8WVF5 259 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 NDRG1Q92597 394 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 SH3KBP1Q96B97 665 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 NPY6RQ99463 290 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 KIFC1Q9BW19 673 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 POMKQ9H5K3 350 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 KCNK1O00180 336 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 CTDSP2O14595 271 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ZNF623O75123 536 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 CD68P34810 354 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ADRA1BP35368 520 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 UPP1Q16831 310 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 CYP51A1Q16850 503 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 TOR2AQ5JU69 321 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 C6orf141Q5SZD1 244 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 TBPL2Q6SJ96 375 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 FSTL5Q8N475 847 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 ZMIZ2Q8NF64 920 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 POP5Q969H6 163 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 HHIPL1Q96JK4 782 aa13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 INTS10Q9NVR2 710 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-204ENST00000449372 AGAP5A6NIR3 686 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 H0Y626 953 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 SSX4O60224 188 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 COL6A1P12109 1028 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 RFC2P35250 354 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 GLRBP48167 497 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 FLT3LGP49771 235 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 PITX1P78337 314 aaPredicted RBP13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 FOXM1Q08050 763 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 EPS8Q12929 822 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 MEP1AQ16819 746 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 FLCNQ8NFG4 579 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 SLC7A14Q8TBB6 771 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 GAD1Q99259 594 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 PKMYT1Q99640 499 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 PAAF1Q9BRP4 392 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 C6orf62Q9GZU0 229 aaPredicted RBP13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 PCDHB3Q9Y5E6 796 aa13.27□□□□□ -0.28
SYNGAP1-204ENST00000449372 MT-ND1P03886 318 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 LTA4HP09960 611 aaKnown RBP13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 FCGRTP55899 365 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 NLGN4XQ8N0W4 816 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 ATPAF2Q8N5M1 289 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 RORBQ92753 470 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 LPPQ93052 612 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 SENP8Q96LD8 212 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 GDF15Q99988 308 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 TBL1YQ9BQ87 522 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 FTHL17Q9BXU8 183 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 FBXL12Q9NXK8 326 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 PSKH1P11801 424 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 NDUFV1P49821 464 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 FAM26DQ5JW98 314 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 CATSPERBQ9H7T0 1116 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 TLR9Q9NR96 1032 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 PAK1IP1Q9NWT1 392 aaPredicted RBP13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 FIS1Q9Y3D6 152 aa13.27□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZCWPW2A0A1B0GU75 182 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 LDLRP01130 860 aa13.26□□□□□ -0.29
SYNGAP1-204ENST00000449372 PRKCZQ05513 592 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms