RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SLC35F6Q8N357 371 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 HM13Q8TCT9 377 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 KLHL6Q8WZ60 621 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 ART4Q93070 314 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 RMDN2Q96LZ7 410 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 CCM2Q9BSQ5 444 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 DDA1Q9BW61 102 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 CPNE5Q9HCH3 593 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 TREX1Q9NSU2 369 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 SIDT1Q9NXL6 827 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 TCAF1Q9Y4C2 921 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 B3GALT1Q9Y5Z6 326 aa13.75□□□□□ -0.21
RTFDC1-204ENST00000449062 HELZ2Q9BYK8 2649 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 EFCAB7A8K855 629 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 CAPN5O15484 640 aaPredicted RBP13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 ZSCAN12O43309 604 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 OR1I1O60431 355 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 GOT2P00505 430 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 AMD1P17707 334 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 TPSB2P20231 275 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 CD82P27701 267 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 PBLDP30039 288 aaPredicted RBP13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 NSG1P42857 185 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 MAPK9P45984 424 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 CAPZBP47756 277 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 LMAN1P49257 510 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 UCNP55089 124 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 SEMA3AQ14563 771 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 KCNJ11Q14654 390 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 TPSAB1Q15661 275 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 PCSK4Q6UW60 755 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 OR4L1Q8NH43 312 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 ACTRT1Q8TDG2 376 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 OSBPL9Q96SU4 736 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 KIFC1Q9BW19 673 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 AP1M1Q9BXS5 423 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 KIR3DX1Q9H7L2 352 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 COG4Q9H9E3 785 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 TRMT1Q9NXH9 659 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 SLC39A1Q9NY26 324 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 SMARCAL1Q9NZC9 954 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 SLC24A2Q9UI40 661 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 CFAP20Q9Y6A4 193 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 PIKFYVEQ9Y2I7 2098 aa13.74□□□□□ -0.21
RTFDC1-204ENST00000449062 SDK2Q58EX2 2172 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 USP27XA6NNY8 438 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 K7ENP7 123 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 GAS8O95995 478 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 GSTM1P09488 218 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 LIPCP11150 499 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 ARNTP27540 789 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 COILP38432 576 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 CD151P48509 253 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 SESN2P58004 480 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 PPP1CAP62136 330 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 CRADDP78560 199 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 GSTM4Q03013 218 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 VAC14Q08AM6 782 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 RPA4Q13156 261 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 SRSF6Q13247 344 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 TRIP13Q15645 432 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 TMEM164Q5U3C3 297 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 ANKS6Q68DC2 871 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 DUS1LQ6P1R4 473 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 LRRC8BQ6P9F7 803 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 INO80CQ6PI98 192 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 GSTA5Q7RTV2 222 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 GPR155Q7Z3F1 870 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 PRSS42Q7Z5A4 293 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 CAND1Q86VP6 1230 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 JPH3Q8WXH2 748 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 NKD1Q969G9 470 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 MAGOHBQ96A72 148 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 C12orf66Q96MD2 445 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 FCRL3Q96P31 734 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 TGM7Q96PF1 710 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 CCNL2Q96S94 520 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 ASPSCR1Q9BZE9 553 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 APMAPQ9HDC9 416 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 IMP3Q9NV31 184 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 MARCH4Q9P2E8 410 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 KLHL3Q9UH77 587 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 PILRAQ9UKJ1 303 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 SEC16AO15027 2179 aa13.73□□□□□ -0.21
RTFDC1-204ENST00000449062 SLC5A10A0PJK1 596 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 BHMG1C9JSJ3 638 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 CES2O00748 559 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 KRT14P02533 472 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 WT1P19544 449 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 ACADLP28330 430 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 TMPRSS3P57727 454 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 CXADRP78310 365 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 BASP1P80723 227 aaKnown RBP13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 BROXQ5VW32 411 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 ANKRD22Q5VYY1 191 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 AFTPHQ6ULP2 937 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 CERS6Q6ZMG9 384 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 CPT1BQ92523 772 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 ZDHHC12Q96GR4 267 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 SLC41A2Q96JW4 573 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms