RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 E5RI56 91 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 DKK1O94907 266 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 EML2O95834 649 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 APOA4P06727 396 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 GSTA2P09210 222 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 ERVK-10P10266 1014 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 XRCC1P18887 633 aaPredicted RBP12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 SLC1A2P43004 574 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 GPR3P46089 330 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 TUBB4BP68371 445 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 CTBP1Q13363 440 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 CUL1Q13616 776 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 BOP1Q14137 746 aaKnown RBP12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 FRG1Q14331 258 aaKnown RBP12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 FASTKD3Q14CZ7 662 aaKnown RBP12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 TMED2Q15363 201 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 TRADDQ15628 312 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 KIAA0408Q6ZU52 694 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 DENND6AQ8IWF6 608 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 SFTPA2Q8IWL1 248 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 RBM12BQ8IXT5 1001 aaKnown RBP12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 GALNT15Q8N3T1 639 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 ASZ1Q8WWH4 475 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 LPGAT1Q92604 370 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 CDKL2Q92772 493 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 SLC38A3Q99624 504 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 P2RY12Q9H244 342 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 ZFATQ9P243 1243 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 CPNE7Q9UBL6 633 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 FBXO5Q9UKT4 447 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 PSMD13Q9UNM6 376 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 COMMD10Q9Y6G5 202 aa12.82□□□□□ -0.36
ERGIC3-209ENST00000447986 CFAP54Q96N23 3096 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 ALDH4A1P30038 563 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 FMO4P31512 558 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 CARSP49589 748 aaKnown RBP12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 PPM1FP49593 454 aaPredicted RBP12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 KRT33BQ14525 404 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 PERM1Q5SV97 790 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 DHRS13Q6UX07 377 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 FAM83HQ6ZRV2 1179 aaPredicted RBP12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 CNTN4Q8IWV2 1026 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 FMO2Q99518 471 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 WDR83Q9BRX9 315 aaKnown RBP12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 WWP1Q9H0M0 922 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 SYNDIG1Q9H7V2 258 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 FBXO6Q9NRD1 293 aaPredicted RBP12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 ZDHHC18Q9NUE0 388 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 IMP3Q9NV31 184 aaKnown RBP12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 NSMCE4AQ9NXX6 385 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 HEBP2Q9Y5Z4 205 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 COLEC10Q9Y6Z7 277 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 DNAH14Q0VDD8 3507 aa12.81□□□□□ -0.36
ERGIC3-209ENST00000447986 PPM1DO15297 605 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 OPA1O60313 960 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 SPAG6O75602 509 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 S1PR4O95977 384 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 RHOXF2BP0C7M4 288 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 PKMP14618 531 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 BRAFP15056 766 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 ITGB6P18564 788 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 CHRM3P20309 590 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 MAGEA4P43358 317 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 LEPRP48357 1165 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 CD151P48509 253 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 MGAT5Q09328 741 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 FOXC1Q12948 553 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 SPIDRQ14159 915 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 CLCA4Q14CN2 919 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 BRD3Q15059 726 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 CAPN12Q6ZSI9 719 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 OTOAQ7RTW8 1153 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 UNC5BQ8IZJ1 945 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 Q8N9G6 341 aaPredicted RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 C2CD4AQ8NCU7 369 aaPredicted RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 AHCYL2Q96HN2 611 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 C12orf66Q96MD2 445 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 BIRC8Q96P09 236 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 RHOXF2Q9BQY4 288 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 KCNK4Q9NYG8 393 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 SCHIP1Q9P0W5 487 aaPredicted RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 WDR37Q9Y2I8 494 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 OR52A4PA6NMU1 304 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 IQCF5A8MTL0 148 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 BHMG1C9JSJ3 638 aaPredicted RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 TCEA3O75764 348 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 RPLP0P05388 317 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 ADRB1P08588 477 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 NDUFS1P28331 727 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 CCR7P32248 378 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 SLC19A1P41440 591 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 EPHA4P54764 986 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 UBE2IP63279 158 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 GPLD1P80108 840 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 HSPA14Q0VDF9 509 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 ILF2Q12905 390 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 NR1D2Q14995 579 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 RPE65Q16518 533 aa12.8□□□□□ -0.36
ERGIC3-209ENST00000447986 CTSL3PQ5NE16 218 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms