RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ZBTB44Q8NCP5 570 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 FAM76AQ8TAV0 307 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 HM13Q8TCT9 377 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 SCYL1Q96KG9 808 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 OR2M4Q96R27 311 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 TMEM216Q9P0N5 145 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 GULP1Q9UBP9 304 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 SLC23A2Q9UGH3 650 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 DNAJC16Q9Y2G8 782 aa19.17■□□□□ 0.66
SGCE-207ENST00000447873 LRP4O75096 1905 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 TLR4O00206 839 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 EIF3FO00303 357 aaPredicted RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 GPC4O75487 556 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 ACP5P13686 325 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 VCLP18206 1134 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 AFF3P51826 1226 aaKnown RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 PLOD1Q02809 727 aaPredicted RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 NFE2L1Q14494 772 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 ACAP2Q15057 778 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 ALG11Q2TAA5 492 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 ZNF658BQ4V348 819 aaPredicted RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 LRRC8EQ6NSJ5 796 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 LAYNQ6UX15 382 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 HID1Q8IV36 788 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 SKA2Q8WVK7 121 aaPredicted RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 SKA1Q96BD8 255 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 PDLIM5Q96HC4 596 aaKnown RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 ZC3H10Q96K80 434 aaKnown RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 GPR78Q96P69 363 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 TIMM29Q9BSF4 260 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 C12orf65Q9H3J6 166 aaKnown RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 CNOT10Q9H9A5 744 aaKnown RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 COG4Q9H9E3 785 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 SLC17A7Q9P2U7 560 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 PCDHGA2Q9Y5H1 932 aa19.16■□□□□ 0.66
SGCE-207ENST00000447873 TNRC6BQ9UPQ9 1833 aaKnown RBP19.16■□□□□ 0.66
SGCE-207ENST00000447873 SLC5A10A0PJK1 596 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 SCAMP1O15126 338 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 GALR2O43603 387 aaPredicted RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 SLCO2B1O94956 709 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 GNSP15586 552 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 PREPP48147 710 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 ATP1A2P50993 1020 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 NUBP1P53384 320 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 SIM2Q14190 667 aaPredicted RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 FZD2Q14332 565 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 GBX1Q14549 363 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 CCDC153Q494R4 210 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 PIWIL4Q7Z3Z4 852 aaKnown RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 PARGQ86W56 976 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 VRK3Q8IV63 474 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 FSTL5Q8N475 847 aaPredicted RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 LILRA3Q8N6C8 439 aaPredicted RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 MDM1Q8TC05 714 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 GLMNQ92990 594 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 FAM111AQ96PZ2 611 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 KLC4Q9NSK0 619 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 CDYLQ9Y232 598 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 DGKBQ9Y6T7 804 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 ATXN2Q99700 1313 aaKnown RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 ZBTB14O43829 449 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 KCNJ13O60928 360 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 RASGRP1O95267 797 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 TNFP01375 233 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 RBP1P09455 135 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 TFEBP19484 476 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 CSNK1EP49674 416 aaKnown RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 IRX4P78413 519 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 FAM83HQ6ZRV2 1179 aaPredicted RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 ISCA2Q86U28 154 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 CCDC63Q8NA47 563 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 MGARPQ8TDB4 240 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 TFB2MQ9H5Q4 396 aaKnown RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 ALG9Q9H6U8 611 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 MLXIPLQ9NP71 852 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 EMCNQ9ULC0 261 aa19.15■□□□□ 0.66
SGCE-207ENST00000447873 PNMA8BQ9ULN7 279 aaPredicted RBP19.15■□□□□ 0.66
SGCE-207ENST00000447873 ZFC3H1O60293 1989 aaKnown RBP19.14■□□□□ 0.66
SGCE-207ENST00000447873 PRR5-ARHGAP8B1AHC4 643 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 H3BM21 787 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 BTN3A1O00481 513 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 VILLO15195 856 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 PLIN3O60664 434 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 BLKP51451 505 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 HK3P52790 923 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 C21orf59P57076 290 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 DMPKQ09013 629 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 EIF2B5Q13144 721 aaKnown RBP19.14■□□□□ 0.65
SGCE-207ENST00000447873 LRP8Q14114 963 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 TEAD4Q15561 434 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 LVRNQ6Q4G3 990 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 NEK10Q6ZWH5 1172 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 SLC22A15Q8IZD6 547 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 ARMC2Q8NEN0 867 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 DENND1AQ8TEH3 1009 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 KIAA1191Q96A73 305 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 PAIP2Q9BPZ3 127 aaKnown RBP19.14■□□□□ 0.65
SGCE-207ENST00000447873 MRPL57Q9BQC6 102 aaKnown RBP19.14■□□□□ 0.65
SGCE-207ENST00000447873 MRPL46Q9H2W6 279 aaKnown RBP19.14■□□□□ 0.65
SGCE-207ENST00000447873 DPEP2Q9H4A9 486 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms