RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 TRIM42Q8IWZ5 723 aa24.41■■□□□ 1.5
RFFL-206ENST00000447669 SPEM1Q8N4L4 309 aa24.41■■□□□ 1.5
RFFL-206ENST00000447669 AGR3Q8TD06 166 aa24.41■■□□□ 1.5
RFFL-206ENST00000447669 APOOQ9BUR5 198 aa24.41■■□□□ 1.5
RFFL-206ENST00000447669 DNAJC16Q9Y2G8 782 aa24.41■■□□□ 1.5
RFFL-206ENST00000447669 LATO43561 262 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 GPC4O75487 556 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 IGLV3-19P01714 112 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 GFAPP14136 432 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 PRKAA2P54646 552 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 NFE2L1Q14494 772 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 ZNF658BQ4V348 819 aaPredicted RBP24.4■■□□□ 1.5
RFFL-206ENST00000447669 FOXR1Q6PIV2 292 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 BMFQ96LC9 184 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 C1QTNF7Q9BXJ2 289 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 ZNHIT2Q9UHR6 403 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 ASB1Q9Y576 335 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 KNL1Q8NG31 2342 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 SDK1Q7Z5N4 2213 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 IGHV1OR15-9A0A0B4J2B8 117 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 VEGFDO43915 354 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 NUAK1O60285 661 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 ABCE1P61221 599 aaKnown RBP24.4■■□□□ 1.5
RFFL-206ENST00000447669 ABRQ12979 859 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 TCEA2Q15560 299 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 TGFBIQ15582 683 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 PPP1R3AQ16821 1122 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 BCL7AQ4VC05 210 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 FAM83HQ6ZRV2 1179 aaPredicted RBP24.4■■□□□ 1.5
RFFL-206ENST00000447669 CFAP61Q8NHU2 1237 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 ASZ1Q8WWH4 475 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 BIRC7Q96CA5 298 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 NPHS2Q9NP85 383 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 PHPT1Q9NRX4 125 aaPredicted RBP24.4■■□□□ 1.5
RFFL-206ENST00000447669 CIDEBQ9UHD4 219 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 MOSPD1Q9UJG1 213 aa24.4■■□□□ 1.5
RFFL-206ENST00000447669 NCOR1O75376 2440 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 SMIM24O75264 130 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 TPBGLP0DKB5 382 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 CD6P30203 668 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 SYTL3Q4VX76 610 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 PLEKHS1Q5SXH7 462 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 EPHX3Q9H6B9 360 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 THAP1Q9NVV9 213 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 CD274Q9NZQ7 290 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 PLEKHM1Q9Y4G2 1056 aa24.39■■□□□ 1.5
RFFL-206ENST00000447669 TECTAO75443 2155 aa24.39■■□□□ 1.49
RFFL-206ENST00000447669 SLC5A10A0PJK1 596 aa24.39■■□□□ 1.49
RFFL-206ENST00000447669 F8W8V4 182 aa24.39■■□□□ 1.49
RFFL-206ENST00000447669 CHUKO15111 745 aa24.39■■□□□ 1.49
RFFL-206ENST00000447669 MYCLP1P12525 358 aaPredicted RBP24.39■■□□□ 1.49
RFFL-206ENST00000447669 FRA10AC1Q70Z53 315 aa24.39■■□□□ 1.49
RFFL-206ENST00000447669 LSMEM2Q8N112 164 aa24.39■■□□□ 1.49
RFFL-206ENST00000447669 RFWD2Q8NHY2 731 aa24.39■■□□□ 1.49
RFFL-206ENST00000447669 RAB3IL1Q8TBN0 382 aa24.39■■□□□ 1.49
RFFL-206ENST00000447669 NSUN5Q96P11 429 aaKnown RBP24.39■■□□□ 1.49
RFFL-206ENST00000447669 PNPOQ9NVS9 261 aa24.39■■□□□ 1.49
RFFL-206ENST00000447669 ZFC3H1O60293 1989 aaKnown RBP24.38■■□□□ 1.49
RFFL-206ENST00000447669 QSOX1O00391 747 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 SLCO2B1O94956 709 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 APBB3O95704 486 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 CEACAM5P06731 702 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 CDH13P55290 713 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 DMWDQ09019 674 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 ARL13AQ5H913 290 aaPredicted RBP24.38■■□□□ 1.49
RFFL-206ENST00000447669 CWF19L1Q69YN2 538 aaKnown RBP24.38■■□□□ 1.49
RFFL-206ENST00000447669 PIGWQ7Z7B1 504 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 FBXO39Q8N4B4 442 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 TMEM159Q96B96 161 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 DCTN4Q9UJW0 460 aa24.38■■□□□ 1.49
RFFL-206ENST00000447669 PPP6CO00743 305 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 SNX3O60493 162 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 CBSLP0DN79 551 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 HNRNPA2B1P22626 353 aaKnown RBP24.37■■□□□ 1.49
RFFL-206ENST00000447669 CBSP35520 551 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 TSSK4Q6SA08 328 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 GCNT7Q6ZNI0 430 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 SPDYE1Q8NFV5 336 aaPredicted RBP24.37■■□□□ 1.49
RFFL-206ENST00000447669 SNX19Q92543 992 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 FAM126AQ9BYI3 521 aaPredicted RBP24.37■■□□□ 1.49
RFFL-206ENST00000447669 KLHL42Q9P2K6 505 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 EML5Q05BV3 1969 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 BDP1A6H8Y1 2624 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 LAMA1P25391 3075 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 C10orf142B7Z368 130 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 GRID2O43424 1007 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 GRK2P25098 689 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 RPS9P46781 194 aaKnown RBP24.37■■□□□ 1.49
RFFL-206ENST00000447669 DNAJB13P59910 316 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 UNC50Q53HI1 259 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 ZNF678Q5SXM1 525 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 KIAA0895LQ68EN5 471 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 CHST15Q7LFX5 561 aaPredicted RBP24.37■■□□□ 1.49
RFFL-206ENST00000447669 ZNF781Q8N8C0 355 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 SEC16BQ96JE7 1060 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 NSRP1Q9H0G5 558 aaKnown RBP24.37■■□□□ 1.49
RFFL-206ENST00000447669 COG4Q9H9E3 785 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 PNMA8BQ9ULN7 279 aaPredicted RBP24.37■■□□□ 1.49
RFFL-206ENST00000447669 GPR34Q9UPC5 381 aa24.37■■□□□ 1.49
RFFL-206ENST00000447669 WDFY4Q6ZS81 3184 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms