RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 UTP14AQ9BVJ6 771 aaKnown RBP4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC5A7Q9GZV3 580 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 DNAJC18Q9H819 358 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 NOL11Q9H8H0 719 aaKnown RBP4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 MTMR10Q9NXD2 777 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 ATP6V0A2Q9Y487 856 aa4.38□□□□□ -1.71
HMGB1P48-201ENST00000446155 ARHGEF40Q8TER5 1519 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 OOEPA6NGQ2 149 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 PRPSAP2O60256 369 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 CH25HO95992 272 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 FAM58BPP0C7Q3 252 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 VPREB1P12018 145 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 EEF2P13639 858 aaKnown RBP4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 ADRA2CP18825 462 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 C21orf33P30042 268 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 CDC25AP30304 524 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 PCGF2P35227 344 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 RPL3P39023 403 aaKnown RBP4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 PRCPP42785 496 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 RAD23BP54727 409 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 STARD6P59095 220 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 STX1BP61266 288 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 SIRPAP78324 504 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 LTBQ06643 244 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 MZT1Q08AG7 82 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 NAE1Q13564 534 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC39A12Q504Y0 691 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 EFHC1Q5JVL4 640 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 C6orf136Q5SQH8 315 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 PLA2G4FQ68DD2 849 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 GALNT17Q6IS24 598 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 TMEM270Q6UE05 265 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 MOXD1Q6UVY6 613 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 UNC5DQ6UXZ4 953 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 SPATA21Q7Z572 469 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 FOXRED2Q8IWF2 684 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 GRAPLQ8TC17 118 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 ELP5Q8TE02 316 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 EGLN2Q96KS0 407 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 RMDN2Q96LZ7 410 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZNF570Q96NI8 536 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 NEK1Q96PY6 1258 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 TSPAN18Q96SJ8 248 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 ABHD6Q9BV23 337 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 C1orf21Q9H246 121 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 KCNK15Q9H427 330 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 CNIH4Q9P003 139 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 SEPT10Q9P0V9 454 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 WNT16Q9UBV4 365 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 CDC14AQ9UNH5 594 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 CLIC4Q9Y696 253 aa4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 SPAG9O60271 1321 aaKnown RBP4.37□□□□□ -1.71
HMGB1P48-201ENST00000446155 SRRM3A6NNA2 597 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 AKR1B15C9JRZ8 316 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 H0YIN7 160 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC33A1O00400 549 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 TXNL1O43396 289 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZIC3O60481 467 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 KCNJ13O60928 360 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 NDUFS7O75251 213 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 NGFRP08138 427 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 INHBAP08476 426 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 OR52Z1P0C646 297 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 LINGO3P0C6S8 592 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 SNHG28P0DPA3 235 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 PLA2G2AP14555 144 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 PFKFB1P16118 471 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 CDKN2AP42771 156 aaKnown RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 POLR2FP61218 127 aaKnown RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ASIC1P78348 528 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ARF5P84085 180 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 RBPJQ06330 500 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ACSM1Q08AH1 577 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 TEFQ10587 303 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 NPRL3Q12980 569 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 FHL1Q13642 323 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 KRT33BQ14525 404 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 PTPRCAPQ14761 206 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 NFATC4Q14934 902 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 FAM91A1Q658Y4 838 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 TYW3Q6IPR3 259 aaKnown RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 TEX38Q6PEX7 206 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ABRAXAS1Q6UWZ7 409 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 B3GNT6Q6ZMB0 384 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZNF517Q6ZMY9 492 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 DPPA4Q7L190 304 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 RABEPKQ7Z6M1 372 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ABI3BPQ7Z7G0 1075 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZC3HC1Q86WB0 502 aaKnown RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 MAML2Q8IZL2 1156 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 AFAP1Q8N556 730 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 SPACA9Q96E40 222 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 HES6Q96HZ4 224 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 TXNDC15Q96J42 360 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ACOX2Q99424 681 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 NTPCRQ9BSD7 190 aaKnown RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 TMEM204Q9BSN7 226 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 MMTAG2Q9BU76 263 aaKnown RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 CACNG6Q9BXT2 260 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms