RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 OR7A17O14581 309 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 STX16O14662 325 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 GRM6O15303 877 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 SMNDC1O75940 238 aaKnown RBP eCLIP16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 DGKQP52824 942 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 CRY1Q16526 586 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 CPSF6Q16630 551 aaKnown RBP eCLIP16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 ATP6AP1LQ52LC2 224 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 CARD16Q5EG05 197 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 RNF220Q5VTB9 566 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 TPRG1Q6ZUI0 275 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 PCYOX1LQ8NBM8 494 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 DCUN1D1Q96GG9 259 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 PCDHGB4Q9UN71 923 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 PCDHGB5Q9Y5G0 923 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 MYOCOSA0A1B0GUC4 107 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 FAM149AA5PLN7 773 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 TAPBPO15533 448 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 SOCS5O75159 536 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 LEFTY1O75610 366 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 MTHFD1P11586 935 aaKnown RBP16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 ETV3P41162 512 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 VIPR2P41587 438 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 KCNK10P57789 538 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 C6orf136Q5SQH8 315 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 GRAMD4Q6IC98 578 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 IRGCQ6NXR0 463 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 TXNDC11Q6PKC3 985 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 TMC5Q6UXY8 1006 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 SPPL2CQ8IUH8 684 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 VRK3Q8IV63 474 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 SFRP1Q8N474 314 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 SCRN2Q96FV2 425 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 ANKRD27Q96NW4 1050 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 SPHK2Q9NRA0 654 aa16.53■□□□□ 0.24
LAPTM4B-201ENST00000445593 NUP214P35658 2090 aaPredicted RBP16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 KIAA0355O15063 1070 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 SH3BGRLO75368 114 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 TIPRLO75663 272 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 C1SP09871 688 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 CEBPBP17676 345 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 FUT4P22083 530 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 DGKAP23743 735 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 RPL38P63173 70 aaKnown RBP16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 B4GALNT1Q00973 533 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 GK3PQ14409 553 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 Q6ZSR9 355 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 PHC3Q8NDX5 983 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 ARL15Q9NXU5 204 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 NUDT4Q9NZJ9 180 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 SCOCQ9UIL1 159 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 ZNF510Q9Y2H8 683 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 RNF11Q9Y3C5 154 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 PLK4O00444 970 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 G6PDP11413 515 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 SLC2A4P14672 509 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 PTPN2P17706 415 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 CCR7P32248 378 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 METAP1P53582 386 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 PTGR1Q14914 329 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 SLC2A7Q6PXP3 512 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 ITFG1Q8TB96 612 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 VOPP1Q96AW1 172 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 ULK4Q96C45 1275 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 ASB9Q96DX5 294 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 INTS7Q9NVH2 962 aaKnown RBP16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 OPTCQ9UBM4 332 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 PCDHGA4Q9Y5G9 962 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 GPR45Q9Y5Y3 372 aa16.52■□□□□ 0.24
LAPTM4B-201ENST00000445593 INPP4BO15327 924 aa16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 IDO1P14902 403 aa16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 NELFEP18615 380 aaKnown RBP16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 ATP6V1B2P21281 511 aa16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 IL12AP29459 219 aa16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 PBLDP30039 288 aaPredicted RBP16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 RFTN2Q52LD8 501 aaPredicted RBP16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 FBXL19Q6PCT2 694 aa16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 ARHGAP22Q7Z5H3 698 aa16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 OR2A12Q8NGT7 310 aa16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 CNBD2Q96M20 576 aa16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 ATG10Q9H0Y0 220 aa16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 SDR39U1Q9NRG7 319 aaPredicted RBP16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 SPTBN5Q9NRC6 3674 aaKnown RBP16.52■□□□□ 0.23
LAPTM4B-201ENST00000445593 EFCAB14O75071 495 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 HLA-EP13747 358 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 VCLP18206 1134 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 XPAP23025 273 aaPredicted RBP16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 MAPK8P45983 427 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 CREMQ03060 361 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 MED21Q13503 144 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 AP5B1Q2VPB7 878 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 ARHGAP15Q53QZ3 475 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 C6orf10Q5SRN2 563 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 RARS2Q5T160 578 aaKnown RBP16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 MPP7Q5T2T1 576 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 C6orf52Q5T4I8 152 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 ADIPOR2Q86V24 386 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 RALGPS2Q86X27 583 aaPredicted RBP16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 EME1Q96AY2 570 aa16.51■□□□□ 0.23
LAPTM4B-201ENST00000445593 PPM1MQ96MI6 270 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms