RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 SERPINA9Q86WD7 417 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 ZSCAN1Q8NBB4 408 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 RCBTB1Q8NDN9 531 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 OR6P1Q8NGX9 317 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 HM13Q8TCT9 377 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 GRK7Q8WTQ7 553 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 MAGOHBQ96A72 148 aaKnown RBP10.86□□□□□ -0.67
HLA-F-221ENST00000444621 LINC00615Q96LM1 132 aaPredicted RBP10.86□□□□□ -0.67
HLA-F-221ENST00000444621 TEFMQ96QE5 360 aaKnown RBP10.86□□□□□ -0.67
HLA-F-221ENST00000444621 ZPBPQ9BS86 351 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 TBC1D10AQ9BXI6 508 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 SLC40A1Q9NP59 571 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 EIF2B3Q9NR50 452 aaKnown RBP10.86□□□□□ -0.67
HLA-F-221ENST00000444621 PIH1D1Q9NWS0 290 aaKnown RBP10.86□□□□□ -0.67
HLA-F-221ENST00000444621 SLC39A1Q9NY26 324 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 SMARCAL1Q9NZC9 954 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 ZNF624Q9P2J8 865 aaPredicted RBP10.86□□□□□ -0.67
HLA-F-221ENST00000444621 ANKMY1Q9P2S6 941 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 FAM8A1Q9UBU6 413 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 KLHL3Q9UH77 587 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 RIMKLBQ9ULI2 386 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 PSMD13Q9UNM6 376 aa10.86□□□□□ -0.67
HLA-F-221ENST00000444621 ZNF106Q9H2Y7 1883 aaKnown RBP10.86□□□□□ -0.67
HLA-F-221ENST00000444621 TEX15Q9BXT5 2789 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 NBPF19A0A087WUL8 3843 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 MROH6A6NGR9 719 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 OR52A4PA6NMU1 304 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 EFCAB7A8K855 629 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 AGAP14A8MT82 685 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 B4E171 279 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 GAPDHSO14556 408 aaPredicted RBP10.85□□□□□ -0.67
HLA-F-221ENST00000444621 CASC3O15234 703 aaKnown RBP10.85□□□□□ -0.67
HLA-F-221ENST00000444621 TOX3O15405 576 aaPredicted RBP10.85□□□□□ -0.67
HLA-F-221ENST00000444621 SUV39H1O43463 412 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 KDM1AO60341 852 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 RASSF9O75901 435 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 FTH1P02794 183 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 THRAP10827 490 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 LIPCP11150 499 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 RPL22P35268 128 aaKnown RBP10.85□□□□□ -0.67
HLA-F-221ENST00000444621 TSPAN7P41732 249 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 PLOD1Q02809 727 aaPredicted RBP10.85□□□□□ -0.67
HLA-F-221ENST00000444621 PRKAA1Q13131 559 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 CLN3Q13286 438 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 MSLNQ13421 630 aaPredicted RBP10.85□□□□□ -0.67
HLA-F-221ENST00000444621 NFE2L1Q14494 772 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 ITIH4Q14624 930 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 CLCA4Q14CN2 919 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 C16orf72Q14CZ0 275 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 RPE65Q16518 533 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 LINC00303Q3SY05 128 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 CCDC38Q502W7 563 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 TSTD2Q5T7W7 516 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 AFTPHQ6ULP2 937 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 CEACAM20Q6UY09 585 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 C11orf96Q7Z7L8 435 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 OR4L1Q8NH43 312 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 PEX13Q92968 403 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 C12orf66Q96MD2 445 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 IL22Q9GZX6 179 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 WWP1Q9H0M0 922 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 CASS4Q9NQ75 786 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 STARD5Q9NSY2 213 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 IMP3Q9NV31 184 aaKnown RBP10.85□□□□□ -0.67
HLA-F-221ENST00000444621 SCHIP1Q9P0W5 487 aaPredicted RBP10.85□□□□□ -0.67
HLA-F-221ENST00000444621 PDP2Q9P2J9 529 aa10.85□□□□□ -0.67
HLA-F-221ENST00000444621 CCDC78A2IDD5 438 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 PMS2P1A4D2B8 440 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 STMND1H3BQB6 276 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 PGRMC1O00264 195 aaKnown RBP10.84□□□□□ -0.67
HLA-F-221ENST00000444621 CCL22O00626 93 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 GPR39O43194 453 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 KRT14P02533 472 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 MTHFD1P11586 935 aaKnown RBP10.84□□□□□ -0.67
HLA-F-221ENST00000444621 TYRP1P17643 537 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 ITIH1P19827 911 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 KCNJ1P48048 391 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 PRLHRP49683 370 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 SESN2P58004 480 aaPredicted RBP10.84□□□□□ -0.67
HLA-F-221ENST00000444621 RPA4Q13156 261 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 GPR18Q14330 331 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 SYTL3Q4VX76 610 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 MANEAQ5SRI9 462 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 IRGCQ6NXR0 463 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 TMPRSS9Q7Z410 1059 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 SDCCAG8Q86SQ7 713 aaPredicted RBP10.84□□□□□ -0.67
HLA-F-221ENST00000444621 OTUD6BQ8N6M0 293 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 GSDMBQ8TAX9 411 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 HDAC10Q969S8 669 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 TGM7Q96PF1 710 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 FERD3LQ96RJ6 166 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 CCNL2Q96S94 520 aaPredicted RBP10.84□□□□□ -0.67
HLA-F-221ENST00000444621 DDA1Q9BW61 102 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 TRMT1Q9NXH9 659 aaKnown RBP10.84□□□□□ -0.67
HLA-F-221ENST00000444621 SAMD15Q9P1V8 674 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 ACSL6Q9UKU0 697 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 TTC7AQ9ULT0 858 aaPredicted RBP10.84□□□□□ -0.67
HLA-F-221ENST00000444621 TCAF1Q9Y4C2 921 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 AHCTF1Q8WYP5 2266 aa10.84□□□□□ -0.67
HLA-F-221ENST00000444621 TRBV5-4A0A0C4DH59 114 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms