RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 GPR150Q8NGU9 434 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 RMDN2Q96LZ7 410 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 FCRL3Q96P31 734 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 TMEM121BQ9BXQ6 578 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 FOXP3Q9BZS1 431 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 EPB41L5Q9HCM4 733 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 SLC40A1Q9NP59 571 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 C20orf96Q9NUD7 363 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 GNPTGQ9UJJ9 305 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 VPS9D1Q9Y2B5 631 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 HEBP2Q9Y5Z4 205 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 AK5Q9Y6K8 562 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 FRYQ5TBA9 3013 aa17.08■□□□□ 0.32
SMARCAL1-209ENST00000444508 ZCWPW2A0A1B0GU75 182 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 UBA6A0AVT1 1052 aaPredicted RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 TMEM8BA6NDV4 472 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 TTC4O95801 387 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 CCKBRP32239 447 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 PREPP48147 710 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 EIF3BP55884 814 aaKnown RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 PLOD1Q02809 727 aaPredicted RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 SQSTM1Q13501 440 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 TUBB2AQ13885 445 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 BOP1Q14137 746 aaKnown RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 GPR18Q14330 331 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 KRT33BQ14525 404 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 TYSND1Q2T9J0 566 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 PHF19Q5T6S3 580 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 PTRHD1Q6GMV3 140 aaKnown RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 B3GNT8Q7Z7M8 397 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 LMNTD2Q8IXW0 634 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 KIF18AQ8NI77 898 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 GABPB2Q8TAK5 448 aaPredicted RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 CNTNAP3BQ96NU0 1288 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 INSM2Q96T92 566 aaPredicted RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 EBNA1BP2Q99848 306 aaKnown RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 NUDT22Q9BRQ3 303 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 TUBB2BQ9BVA1 445 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 TBC1D10AQ9BXI6 508 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 CNTNAP3Q9BZ76 1288 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 RAB17Q9H0T7 212 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 DPH5Q9H2P9 285 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 CCDC86Q9H6F5 360 aaKnown RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 IL1RAPL1Q9NZN1 696 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 UTP11Q9Y3A2 253 aaKnown RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 CFAP20Q9Y6A4 193 aaKnown RBP17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 COLEC10Q9Y6Z7 277 aa17.07■□□□□ 0.32
SMARCAL1-209ENST00000444508 CCDC187A0A096LP49 1063 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 BANF1O75531 89 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 ITGB6P18564 788 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 RPS3P23396 243 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 NDUFS1P28331 727 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 CRYMQ14894 314 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 PLCL1Q15111 1095 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 ZNF658BQ4V348 819 aaPredicted RBP17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 MSS51Q4VC12 460 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 SPANXN3Q5MJ09 141 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 ZNF470Q6ECI4 717 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 CAPRIN2Q6IMN6 1127 aaKnown RBP17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 XKR5Q6UX68 686 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 CILP2Q8IUL8 1156 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 SLITRK4Q8IW52 837 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 MNS1Q8NEH6 495 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 CALML6Q8TD86 181 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 NCSTNQ92542 709 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 TMEM159Q96B96 161 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 LRRC39Q96DD0 335 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 LIN37Q96GY3 246 aaPredicted RBP17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 PANX3Q96QZ0 392 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 CARD6Q9BX69 1037 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 P2RY12Q9H244 342 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 OR52A5Q9H2C5 316 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 WHRNQ9P202 907 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 FAM169AQ9Y6X4 670 aa17.06■□□□□ 0.32
SMARCAL1-209ENST00000444508 PRAMEF33A0A0G2JMD5 474 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 UBXN7O94888 489 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 PROS1P07225 676 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 AMD1P17707 334 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 PDHA2P29803 388 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 CSF2RBP32927 897 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 ELK3P41970 407 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 CD151P48509 253 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 LIMK2P53671 638 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 GABREP78334 506 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 ZFP36L1Q07352 338 aaKnown RBP17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 CYP4F3Q08477 520 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 EIF3IQ13347 325 aaKnown RBP17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 RTP5Q14D33 572 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 BRD3Q15059 726 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 TMED2Q15363 201 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 C3orf38Q5JPI3 329 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 C8orf74Q6P047 294 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 DUS1LQ6P1R4 473 aaKnown RBP17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 TMEM71Q6P5X7 295 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 WDR74Q6RFH5 385 aaPredicted RBP17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 TMPRSS9Q7Z410 1059 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 PDZD3Q86UT5 571 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 OR4D9Q8NGE8 314 aa17.05■□□□□ 0.32
SMARCAL1-209ENST00000444508 WDR36Q8NI36 951 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms