RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ZNF556Q9HAH1 456 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ZBTB20Q9HC78 741 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 RBM22Q9NW64 420 aaKnown RBP eCLIP4.95□□□□□ -1.622e-7■■■■■ 39.7
HERC1-201ENST00000443617 MYH14Q7Z406 1995 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 CLRN2A0PK11 232 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ERVH48-1M5A8F1 160 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ARSAP15289 507 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 MATKP42679 507 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 SNRPD2P62316 118 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 CYP4F2P78329 520 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 RPP38P78345 283 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 CYP4F3Q08477 520 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 LARP4Q71RC2 724 aaKnown RBP eCLIP4.95□□□□□ -1.622e-7■■■■■ 38.4
HERC1-201ENST00000443617 ITCHQ96J02 903 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 TWNKQ96RR1 684 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 NUSAP1Q9BXS6 441 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 TRIM8Q9BZR9 551 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 SLAMF8Q9P0V8 285 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 HSPE1-MOB4S4R3N1 261 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 LMO7Q8WWI1 1683 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 OR2A25A4D2G3 310 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 AHSGP02765 367 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 C4BPBP20851 252 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 SLC1A2P43004 574 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ATN1P54259 1190 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 DIO3P55073 304 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 SLC25A52Q3SY17 297 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 NRARPQ7Z6K4 114 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 SETD6Q8TBK2 473 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 C2orf49Q9BVC5 232 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 GTPBP2Q9BX10 602 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 PDLIM7Q9NR12 457 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ZMYM5Q9UJ78 669 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 DUSP12Q9UNI6 340 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 SCAF8Q9UPN6 1271 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 KCPQ6ZWJ8 1503 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 PIK3CBP42338 1070 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 DDI2Q5TDH0 399 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 OVOS1Q6IE37 1185 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 TSPYL5Q86VY4 417 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 ACVR1CQ8NER5 493 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 AP2M1Q96CW1 435 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 KATNAL1Q9BW62 490 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 FZD10Q9ULW2 581 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 MYL12BO14950 172 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 PIGRP01833 764 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ITGB3P05106 788 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ITGA2P17301 1181 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 MYL12AP19105 171 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 KCNA5P22460 613 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 GGT5P36269 586 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 PIGAP37287 484 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 FCGRTP55899 365 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ZNF691Q5VV52 312 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 OR2T5Q6IEZ7 315 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 TYW3Q6IPR3 259 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 NIM1KQ8IY84 436 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ABI1Q8IZP0 508 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 OR2T29Q8NH02 315 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 DYNC2LI1Q8TCX1 351 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 CENPIQ92674 756 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 NIPAL2Q9H841 368 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 RWDD3Q9Y3V2 267 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 TCF3P15923 654 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 CCDC85BQ15834 202 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 DUSP7Q16829 419 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 KIAA1614Q5VZ46 1190 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 TP53INP1Q96A56 240 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 PAWRQ96IZ0 340 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 NIFKQ9BYG3 293 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 FAM124BQ9H5Z6 455 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 CLN6Q9NWW5 311 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 NCF1BA6NI72 391 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 A8MT66 165 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 NCF1CA8MVU1 366 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 NCF1P14598 390 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 ADAMTSL2Q86TH1 951 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 EXOC2Q96KP1 924 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 OSBPL2Q9H1P3 480 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 C3orf14Q9HBI5 128 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 AMBNQ9NP70 447 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 TIGARQ9NQ88 270 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 DDIT4Q9NX09 232 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 U3KQV3 271 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ELOVL7A1L3X0 281 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 MEIOCA2RUB1 952 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 PABPN1LA6NDY0 278 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 FSHRP23945 695 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 SH3BP2P78314 561 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ADIGQ0VDE8 80 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 PWP1Q13610 501 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 NR6A1Q15406 480 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 STK11Q15831 433 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 MFSD6LQ8IWD5 586 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 ESX1Q8N693 406 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 PJA1Q8NG27 643 aa4.95□□□□□ -1.62
HERC1-201ENST00000443617 UTP15Q8TED0 518 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 TDRD3Q9H7E2 651 aaKnown RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 SEMA4BQ9NPR2 832 aaPredicted RBP4.95□□□□□ -1.62
HERC1-201ENST00000443617 AKT3Q9Y243 479 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms