RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TRIM16O95361 564 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 C1QAP02745 245 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 GP1BAP07359 652 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 AOAHP28039 575 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 FASLGP48023 281 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 ADARP55265 1226 aaKnown RBP15.69■□□□□ 0.1
USP39-205ENST00000442708 KIR2DS5Q14953 304 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 RPE65Q16518 533 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 CAPRIN2Q6IMN6 1127 aaKnown RBP15.69■□□□□ 0.1
USP39-205ENST00000442708 DUS1LQ6P1R4 473 aaKnown RBP15.69■□□□□ 0.1
USP39-205ENST00000442708 LRRC6Q86X45 466 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 ZNF761Q86XN6 746 aaPredicted RBP15.69■□□□□ 0.1
USP39-205ENST00000442708 VRK3Q8IV63 474 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 LMNTD2Q8IXW0 634 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 CALML6Q8TD86 181 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 ELMO1Q92556 727 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 INSM2Q96T92 566 aaPredicted RBP15.69■□□□□ 0.1
USP39-205ENST00000442708 CCDC3Q9BQI4 270 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 OR52A5Q9H2C5 316 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 LRRC4CQ9HCJ2 640 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 PPANQ9NQ55 473 aaKnown RBP15.69■□□□□ 0.1
USP39-205ENST00000442708 CPNE7Q9UBL6 633 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 GNPTGQ9UJJ9 305 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 CDYLQ9Y232 598 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 APOBEC2Q9Y235 224 aaKnown RBP15.69■□□□□ 0.1
USP39-205ENST00000442708 MED16Q9Y2X0 877 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 PSAT1Q9Y617 370 aa15.69■□□□□ 0.1
USP39-205ENST00000442708 CXorf49A8MYA2 514 aaPredicted RBP15.68■□□□□ 0.1
USP39-205ENST00000442708 QSOX1O00391 747 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 B4GAT1O43505 415 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 OPA1O60313 960 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 AHSGP02765 367 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 ESR1P03372 595 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 GSTM1P09488 218 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 XRCC1P18887 633 aaPredicted RBP15.68■□□□□ 0.1
USP39-205ENST00000442708 LEPRP48357 1165 aaKnown RBP15.68■□□□□ 0.1
USP39-205ENST00000442708 CSE1LP55060 971 aaKnown RBP15.68■□□□□ 0.1
USP39-205ENST00000442708 OR1D5P58170 312 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 CCL7P80098 99 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 INSM1Q01101 510 aaPredicted RBP15.68■□□□□ 0.1
USP39-205ENST00000442708 GSTM4Q03013 218 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 HHEXQ03014 270 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 MGAT5Q09328 741 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 ILKQ13418 452 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 BOP1Q14137 746 aaKnown RBP15.68■□□□□ 0.1
USP39-205ENST00000442708 NR1D2Q14995 579 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 RAB44Q7Z6P3 723 aaPredicted RBP15.68■□□□□ 0.1
USP39-205ENST00000442708 MARCH9Q86YJ5 346 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 PALM2Q8IXS6 379 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 CHCHD4Q8N4Q1 142 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 Q8N9G6 341 aaPredicted RBP15.68■□□□□ 0.1
USP39-205ENST00000442708 NAT6Q93015 286 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 FAM136AQ96C01 138 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 SLC30A3Q99726 388 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 FAM129AQ9BZQ8 928 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 VPS37BQ9H9H4 285 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 SARS2Q9NP81 518 aaKnown RBP15.68■□□□□ 0.1
USP39-205ENST00000442708 ACSL5Q9ULC5 683 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 NFU1Q9UMS0 254 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 WASF3Q9UPY6 502 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 PCDHB1Q9Y5F3 818 aa15.68■□□□□ 0.1
USP39-205ENST00000442708 A0A1W2PQM1 296 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 TCRBV9S1A1TA0A576 114 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 OR5K4A6NMS3 321 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 RHPN2P1A8MT19 583 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 LIN7AO14910 233 aaPredicted RBP15.67■□□□□ 0.1
USP39-205ENST00000442708 GPC4O75487 556 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 PKMP14618 531 aaKnown RBP15.67■□□□□ 0.1
USP39-205ENST00000442708 SLC2A4P14672 509 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 TIAL1Q01085 375 aaKnown RBP eCLIP15.67■□□□□ 0.1
USP39-205ENST00000442708 C3orf62Q6ZUJ4 267 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 SPRED1Q7Z699 444 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 SLC9B2Q86UD5 537 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 IFT20Q8IY31 132 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 OR6C4Q8NGE1 309 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 ADAMTS14Q8WXS8 1223 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 C12orf66Q96MD2 445 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 FMO2Q99518 471 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 SLC40A1Q9NP59 571 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 EVA1BQ9NVM1 165 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 NINJ2Q9NZG7 142 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 MTRF1LQ9UGC7 380 aaKnown RBP15.67■□□□□ 0.1
USP39-205ENST00000442708 UNC13CQ8NB66 2214 aa15.67■□□□□ 0.1
USP39-205ENST00000442708 AKAP13Q12802 2813 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 NTN3O00634 580 aaPredicted RBP15.66■□□□□ 0.1
USP39-205ENST00000442708 PFDN6O15212 129 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 FAM153BP0C7A2 387 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 SLC35G4P0C7Q5 338 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 MYBL2P10244 700 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 MTHFD1P11586 935 aaKnown RBP15.66■□□□□ 0.1
USP39-205ENST00000442708 PNLIPP16233 465 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 ACADLP28330 430 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 ALDH4A1P30038 563 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 HALP42357 657 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 CLCN7P51798 805 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 HSPA14Q0VDF9 509 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 RPA4Q13156 261 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 CUL1Q13616 776 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 KYNUQ16719 465 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms