RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CDH24Q86UP0 819 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 AMZ2Q86W34 360 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 LRRC49Q8IUZ0 686 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 DNAJB14Q8TBM8 379 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 COG1Q8WTW3 980 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 CCDC120Q96HB5 630 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 C17orf62Q9BQA9 187 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 SYTL2Q9HCH5 934 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 ATP13A2Q9NQ11 1180 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 RAD18Q9NS91 495 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 OLAHQ9NV23 265 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 SUCOQ9UBS9 1254 aaKnown RBP13.54□□□□□ -0.24
LINC00642-202ENST00000442515 POMT2Q9UKY4 750 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 FBN3Q75N90 2809 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 NAV3Q8IVL0 2385 aa13.54□□□□□ -0.24
LINC00642-202ENST00000442515 TMCO5BA8MYB1 307 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 MATN3O15232 486 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 PRICKLE3O43900 615 aaPredicted RBP13.53□□□□□ -0.24
LINC00642-202ENST00000442515 KCNJ13O60928 360 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 JRKO75564 520 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 MMP2P08253 660 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 PIRTP0C851 137 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 MSL3P1P0C860 447 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 POLR2CP19387 275 aaPredicted RBP13.53□□□□□ -0.24
LINC00642-202ENST00000442515 PCK1P35558 622 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 CD86P42081 329 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 LMAN1P49257 510 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 GALNT2Q10471 571 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 TMEM115Q12893 351 aaPredicted RBP13.53□□□□□ -0.24
LINC00642-202ENST00000442515 XRCC4Q13426 336 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 NFE2L1Q14494 772 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 CYP2A13Q16696 494 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 DPCR1Q3MIW9 517 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 TIGD7Q6NT04 549 aaPredicted RBP13.53□□□□□ -0.24
LINC00642-202ENST00000442515 IGFL2Q6UWQ7 119 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 ZNF808Q8N4W9 903 aaPredicted RBP13.53□□□□□ -0.24
LINC00642-202ENST00000442515 BCORP1Q8N888 145 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 OR2Y1Q8NGV0 311 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 AGAP3Q96P47 875 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 VPS35Q96QK1 796 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 ADGRE3Q9BY15 652 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 PCDH18Q9HCL0 1135 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 C1GALT1Q9NS00 363 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 HAUS2Q9NVX0 235 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 AMACRQ9UHK6 382 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
LINC00642-202ENST00000442515 PIKFYVEQ9Y2I7 2098 aa13.52□□□□□ -0.24
LINC00642-202ENST00000442515 NIPBLQ6KC79 2804 aaeCLIP13.52□□□□□ -0.24
LINC00642-202ENST00000442515 HBQ1P09105 142 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 CBSLP0DN79 551 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 RARAP10276 462 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 HLA-DPA1P20036 260 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 SSTR2P30874 369 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 CBSP35520 551 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 TDGF1P3P51864 188 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 CTSCP53634 463 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 AIMP2Q13155 320 aaKnown RBP13.52□□□□□ -0.25
LINC00642-202ENST00000442515 TLR1Q15399 786 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 ATP13A5Q4VNC0 1218 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 BOLA3Q53S33 107 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 FCRL6Q6DN72 434 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 TMC3Q7Z5M5 1100 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 TMEM151BQ8IW70 566 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 GDAP1Q8TB36 358 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 LRRN4Q8WUT4 740 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 INSM2Q96T92 566 aaPredicted RBP13.52□□□□□ -0.25
LINC00642-202ENST00000442515 KIR3DX1Q9H7L2 352 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 GPN3Q9UHW5 284 aaPredicted RBP13.52□□□□□ -0.25
LINC00642-202ENST00000442515 SERTAD3Q9UJW9 196 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 ZNF711Q9Y462 761 aa13.52□□□□□ -0.25
LINC00642-202ENST00000442515 TRGV8A0A0C4DH27 118 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 CCDC78A2IDD5 438 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 PCDH17O14917 1159 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 CNOT3O75175 753 aaKnown RBP13.51□□□□□ -0.25
LINC00642-202ENST00000442515 ALOX12BO75342 701 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 POP7O75817 140 aaKnown RBP13.51□□□□□ -0.25
LINC00642-202ENST00000442515 UMODP07911 640 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 ST6GAL1P15907 406 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 PRKAA1Q13131 559 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 ZFYVE27Q5T4F4 411 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 C1orf189Q5VU69 101 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 AGAP7PQ5VUJ5 663 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 TXNRD3NBQ6F5E7 133 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 RPTNQ6XPR3 784 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 FATE1Q969F0 183 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 TTC25Q96NG3 672 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 AGAP4Q96P64 663 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 TRIB3Q96RU7 358 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 GPR63Q9BZJ6 419 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 SLC6A20Q9NP91 592 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 NDOR1Q9UHB4 597 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 FBXL4Q9UKA2 621 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 SVILO95425 2214 aa13.51□□□□□ -0.25
LINC00642-202ENST00000442515 CCDC66A2RUB6 948 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 GSAPA4D1B5 854 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 AGPSO00116 658 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 KCNN4O15554 427 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 SPTBP11277 2137 aa13.5□□□□□ -0.25
LINC00642-202ENST00000442515 HOXB4P17483 251 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms